RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 SLF2Q8IX21 1173 aa12.22□□□□□ -0.45
CAPN1-210ENST00000527699 SH3RF3Q8TEJ3 882 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-210ENST00000527699 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
CAPN1-210ENST00000527699 MYO9BQ13459 2157 aa12.22□□□□□ -0.45
CAPN1-210ENST00000527699 RFX7Q2KHR2 1363 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 PNMA6EA0A0J9YXQ4 647 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 CTNND1O60716 968 aaKnown RBP12.21□□□□□ -0.45
CAPN1-210ENST00000527699 HMGCS2P54868 508 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 TRIM32Q13049 653 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 PDE3AQ14432 1141 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 CCDC85BQ15834 202 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-210ENST00000527699 TEX11Q8IYF3 940 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 HMX1Q9NP08 348 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-210ENST00000527699 LRP2BPQ9P2M1 347 aa12.21□□□□□ -0.45
CAPN1-210ENST00000527699 GPR75-ASB3A0A0A6YYF3 556 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 FAM86C2PA6NEL3 165 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 GNAI3P08754 354 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 MCAMP43121 646 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 G3BP1Q13283 466 aaKnown RBP eCLIP12.2□□□□□ -0.46
CAPN1-210ENST00000527699 IRF5Q13568 498 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 C9orf50Q5SZB4 431 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 MAPKAPK5Q8IW41 473 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 NSUN4Q96CB9 384 aaKnown RBP12.2□□□□□ -0.46
CAPN1-210ENST00000527699 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-210ENST00000527699 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.466e-6■■■■■ 54.7
CAPN1-210ENST00000527699 SAP30BPQ9UHR5 308 aaKnown RBP12.2□□□□□ -0.46
CAPN1-210ENST00000527699 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
CAPN1-210ENST00000527699 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
CAPN1-210ENST00000527699 JAG1P78504 1218 aa12.19□□□□□ -0.46
CAPN1-210ENST00000527699 COA7Q96BR5 231 aa12.19□□□□□ -0.46
CAPN1-210ENST00000527699 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-210ENST00000527699 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-210ENST00000527699 BCL11AQ9H165 835 aa12.19□□□□□ -0.46
CAPN1-210ENST00000527699 DOCK3Q8IZD9 2030 aa12.19□□□□□ -0.46
CAPN1-210ENST00000527699 GDF11O95390 407 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 HMGCRP04035 888 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 GNAI2P04899 355 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 LDHCP07864 332 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 TRIM27P14373 513 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 CAP2P40123 477 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 DYNLL1P63167 89 aaKnown RBP12.18□□□□□ -0.46
CAPN1-210ENST00000527699 GSTO1P78417 241 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 OS9Q13438 667 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-210ENST00000527699 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 TGFBRAP1Q8WUH2 860 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 DBNDD2Q9BQY9 259 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
CAPN1-210ENST00000527699 USP17L5A8MUK1 530 aa12.17□□□□□ -0.46
CAPN1-210ENST00000527699 MTMR2Q13614 643 aa12.17□□□□□ -0.46
CAPN1-210ENST00000527699 NAA16Q6N069 864 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-210ENST00000527699 ADGRA1Q86SQ6 560 aa12.17□□□□□ -0.46
CAPN1-210ENST00000527699 TMEM57Q8N5G2 664 aa12.17□□□□□ -0.46
CAPN1-210ENST00000527699 ZNF280CQ8ND82 737 aa12.17□□□□□ -0.46
CAPN1-210ENST00000527699 NOL10Q9BSC4 688 aaKnown RBP12.17□□□□□ -0.46
CAPN1-210ENST00000527699 ASCC2Q9H1I8 757 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-210ENST00000527699 OGDHLQ9ULD0 1010 aa12.17□□□□□ -0.46
CAPN1-210ENST00000527699 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
CAPN1-210ENST00000527699 PDS5AQ29RF7 1337 aaKnown RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 TBC1D12O60347 775 aa12.16□□□□□ -0.46
CAPN1-210ENST00000527699 CT47B1P0C2W7 299 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 CYP2B6P20813 491 aa12.16□□□□□ -0.46
CAPN1-210ENST00000527699 ARID4AP29374 1257 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 ZAP70P43403 619 aa12.16□□□□□ -0.46
CAPN1-210ENST00000527699 ZYXQ15942 572 aaKnown RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 CRACR2BQ8N4Y2 399 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 TLR7Q9NYK1 1049 aaKnown RBP12.16□□□□□ -0.46
CAPN1-210ENST00000527699 PNMA3Q9UL41 463 aa12.16□□□□□ -0.46
CAPN1-210ENST00000527699 PALD1Q9ULE6 856 aa12.16□□□□□ -0.46
CAPN1-210ENST00000527699 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
CAPN1-210ENST00000527699 UQCRFS1P1P0C7P4 283 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 MTX1Q13505 466 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 FAM110CQ1W6H9 321 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 PROCA1Q8NCQ7 364 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-210ENST00000527699 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 TRIM34Q9BYJ4 488 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-210ENST00000527699 PRDM5Q9NQX1 630 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-210ENST00000527699 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
CAPN1-210ENST00000527699 PTPRFP10586 1907 aa12.14□□□□□ -0.47
CAPN1-210ENST00000527699 IPO8O15397 1037 aaKnown RBP12.14□□□□□ -0.47
CAPN1-210ENST00000527699 SURF6O75683 361 aaKnown RBP12.14□□□□□ -0.47
CAPN1-210ENST00000527699 CYP2E1P05181 493 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-210ENST00000527699 IGFBP4P22692 258 aa12.14□□□□□ -0.47
CAPN1-210ENST00000527699 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-210ENST00000527699 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-210ENST00000527699 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
CAPN1-210ENST00000527699 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
CAPN1-210ENST00000527699 RNPC3Q96LT9 517 aaKnown RBP12.14□□□□□ -0.47
CAPN1-210ENST00000527699 UIMC1Q96RL1 719 aa12.14□□□□□ -0.47
CAPN1-210ENST00000527699 SENP6Q9GZR1 1112 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms