RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 ZFYVE28Q9HCC9 887 aa17.26■□□□□ 0.35
NXF1-204ENST00000527064 ZBTB21Q9ULJ3 1066 aa17.26■□□□□ 0.35
NXF1-204ENST00000527064 PHIPQ8WWQ0 1821 aa17.26■□□□□ 0.35
NXF1-204ENST00000527064 GPR25O00155 361 aa17.25■□□□□ 0.35
NXF1-204ENST00000527064 NEFLP07196 543 aa17.25■□□□□ 0.35
NXF1-204ENST00000527064 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
NXF1-204ENST00000527064 RRP1BQ14684 758 aaKnown RBP17.25■□□□□ 0.35
NXF1-204ENST00000527064 RILPL2Q969X0 211 aa17.25■□□□□ 0.35
NXF1-204ENST00000527064 NACAP1Q9BZK3 213 aa17.25■□□□□ 0.35
NXF1-204ENST00000527064 CABP5Q9NP86 173 aa17.25■□□□□ 0.35
NXF1-204ENST00000527064 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.25■□□□□ 0.35
NXF1-204ENST00000527064 USP17L12C9JPN9 530 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 USP17L21D6R901 530 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 APPP05067 770 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 SHMT1P34896 483 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 TDO2P48775 406 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
NXF1-204ENST00000527064 BAZ2AQ9UIF9 1905 aaKnown RBP17.23■□□□□ 0.35
NXF1-204ENST00000527064 GSG1L2A8MUP6 293 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 PATL2C9JE40 543 aaKnown RBP17.23■□□□□ 0.35
NXF1-204ENST00000527064 PDHXO00330 501 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 FKTNO75072 461 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 GH2P01242 217 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 CYP2D6P10635 497 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 SPP2Q13103 211 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 CTR9Q6PD62 1173 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 GADL1Q6ZQY3 521 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 CCDC84Q86UT8 332 aaPredicted RBP17.23■□□□□ 0.35
NXF1-204ENST00000527064 PROCA1Q8NCQ7 364 aaPredicted RBP17.23■□□□□ 0.35
NXF1-204ENST00000527064 ZNF296Q8WUU4 475 aaPredicted RBP17.23■□□□□ 0.35
NXF1-204ENST00000527064 SEC62Q99442 399 aaKnown RBP17.23■□□□□ 0.35
NXF1-204ENST00000527064 PARK7Q99497 189 aaKnown RBP17.23■□□□□ 0.35
NXF1-204ENST00000527064 SLC45A1Q9Y2W3 748 aa17.23■□□□□ 0.35
NXF1-204ENST00000527064 PTPRFP10586 1907 aa17.22■□□□□ 0.35
NXF1-204ENST00000527064 HIP1O00291 1037 aa17.22■□□□□ 0.35
NXF1-204ENST00000527064 MOGSQ13724 837 aa17.22■□□□□ 0.35
NXF1-204ENST00000527064 C16orf86Q6ZW13 317 aa17.22■□□□□ 0.35
NXF1-204ENST00000527064 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
NXF1-204ENST00000527064 LOC285556D6RIA3 1793 aa17.22■□□□□ 0.35
NXF1-204ENST00000527064 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 PDE4AP27815 886 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
NXF1-204ENST00000527064 PABPC4Q13310 644 aaKnown RBP eCLIP17.21■□□□□ 0.35
NXF1-204ENST00000527064 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 MCMDC2Q4G0Z9 681 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 DYNLL2Q96FJ2 89 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 NAPBQ9H115 298 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 R3HDMLQ9H3Y0 253 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 EPB41L4AQ9HCS5 686 aaPredicted RBP17.21■□□□□ 0.35
NXF1-204ENST00000527064 TMOD4Q9NZQ9 345 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 AGTPBP1Q9UPW5 1226 aa17.21■□□□□ 0.35
NXF1-204ENST00000527064 MYH8P13535 1937 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 C19orf81C9J6K1 198 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 USP17L10C9JJH3 530 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 MPHOSPH10O00566 681 aaKnown RBP17.2■□□□□ 0.34
NXF1-204ENST00000527064 TLR2O60603 784 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 CDK8P49336 464 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 HMGCS2P54868 508 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 BACE1P56817 501 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 JAG1P78504 1218 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 EVX2Q03828 476 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 MTMR2Q13614 643 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 SH3D19Q5HYK7 790 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 TTC22Q5TAA0 569 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 GPAT2Q6NUI2 795 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 TMEM179Q6ZVK1 233 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 IFNL3Q8IZI9 196 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 CCDC17Q96LX7 622 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 PNMA3Q9UL41 463 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
NXF1-204ENST00000527064 A0A0D9SFI3 127 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
NXF1-204ENST00000527064 SDSP20132 328 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
NXF1-204ENST00000527064 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
NXF1-204ENST00000527064 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 CTU1Q7Z7A3 348 aaKnown RBP17.19■□□□□ 0.34
NXF1-204ENST00000527064 SLC44A5Q8NCS7 719 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 FAM227BQ96M60 508 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 FEZ1Q99689 392 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 DIAPH3Q9NSV4 1193 aa17.19■□□□□ 0.34
NXF1-204ENST00000527064 USP14P54578 494 aa17.18■□□□□ 0.34
NXF1-204ENST00000527064 SP3Q02447 781 aa17.18■□□□□ 0.34
NXF1-204ENST00000527064 DGKZQ13574 1117 aa17.18■□□□□ 0.34
NXF1-204ENST00000527064 CCDC171Q6TFL3 1326 aa17.18■□□□□ 0.34
NXF1-204ENST00000527064 ARHGEF6Q15052 776 aa17.17■□□□□ 0.34
NXF1-204ENST00000527064 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
NXF1-204ENST00000527064 SMCR8Q8TEV9 937 aaPredicted RBP17.17■□□□□ 0.34
NXF1-204ENST00000527064 MKNK2Q9HBH9 465 aa17.17■□□□□ 0.34
NXF1-204ENST00000527064 AKR1B1P15121 316 aa17.16■□□□□ 0.34
NXF1-204ENST00000527064 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms