RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 OGDHLQ9ULD0 1010 aa19.76■□□□□ 0.75
PTPRU-210ENST00000527027 LOC285556D6RIA3 1793 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 CYP2E1P05181 493 aaPredicted RBP19.75■□□□□ 0.75
PTPRU-210ENST00000527027 MNX1P50219 401 aaPredicted RBP19.75■□□□□ 0.75
PTPRU-210ENST00000527027 TNNI3KQ59H18 835 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 MAP3K21Q5TCX8 1036 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 C7orf61Q8IZ16 206 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 CLUAP1Q96AJ1 413 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 NUDT12Q9BQG2 462 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 C11orf49Q9H6J7 331 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 DNAJC18Q9H819 358 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 PALD1Q9ULE6 856 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 FPGT-TNNI3KV9GXZ4 949 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 FLT1P17948 1338 aa19.75■□□□□ 0.75
PTPRU-210ENST00000527027 PEX10O60683 326 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 BCAR3O75815 825 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 XRCC5P13010 732 aaKnown RBP19.74■□□□□ 0.75
PTPRU-210ENST00000527027 POLA2Q14181 598 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 ADGRA1Q86SQ6 560 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 SOCS4Q8WXH5 440 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 LRCH3Q96II8 777 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 DBNDD2Q9BQY9 259 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 TXNRD2Q9NNW7 524 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 RBPJLQ9UBG7 517 aa19.74■□□□□ 0.75
PTPRU-210ENST00000527027 GDF11O95390 407 aa19.73■□□□□ 0.75
PTPRU-210ENST00000527027 MAPK4P31152 587 aa19.73■□□□□ 0.75
PTPRU-210ENST00000527027 SHROOM1Q2M3G4 852 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-210ENST00000527027 TRMT44Q8IYL2 757 aaKnown RBP19.73■□□□□ 0.75
PTPRU-210ENST00000527027 SLC17A8Q8NDX2 589 aa19.73■□□□□ 0.75
PTPRU-210ENST00000527027 ZNF512BQ96KM6 892 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-210ENST00000527027 ZBTB21Q9ULJ3 1066 aa19.73■□□□□ 0.75
PTPRU-210ENST00000527027 ZMYND8Q9ULU4 1186 aaPredicted RBP19.73■□□□□ 0.75
PTPRU-210ENST00000527027 COL6A3P12111 3177 aa19.73■□□□□ 0.75
PTPRU-210ENST00000527027 HLA-DOAP06340 250 aa19.72■□□□□ 0.75
PTPRU-210ENST00000527027 PRKAR2AP13861 404 aaKnown RBP19.72■□□□□ 0.75
PTPRU-210ENST00000527027 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
PTPRU-210ENST00000527027 OS9Q13438 667 aaPredicted RBP19.72■□□□□ 0.75
PTPRU-210ENST00000527027 PDE3AQ14432 1141 aa19.72■□□□□ 0.75
PTPRU-210ENST00000527027 Q3C1V9 767 aa19.72■□□□□ 0.75
PTPRU-210ENST00000527027 CCAR1Q8IX12 1150 aaKnown RBP19.72■□□□□ 0.75
PTPRU-210ENST00000527027 SSH3Q8TE77 659 aa19.72■□□□□ 0.75
PTPRU-210ENST00000527027 GTF3C2Q8WUA4 911 aaPredicted RBP19.72■□□□□ 0.75
PTPRU-210ENST00000527027 SURF6O75683 361 aaKnown RBP19.71■□□□□ 0.75
PTPRU-210ENST00000527027 ZAP70P43403 619 aa19.71■□□□□ 0.75
PTPRU-210ENST00000527027 ERVK-9P63128 1117 aa19.71■□□□□ 0.75
PTPRU-210ENST00000527027 ERVK-24P63145 666 aa19.71■□□□□ 0.75
PTPRU-210ENST00000527027 USP17L2Q6R6M4 530 aa19.71■□□□□ 0.75
PTPRU-210ENST00000527027 TMEM57Q8N5G2 664 aa19.71■□□□□ 0.75
PTPRU-210ENST00000527027 USP6NLQ92738 828 aa19.71■□□□□ 0.75
PTPRU-210ENST00000527027 EMILIN3Q9NT22 766 aa19.71■□□□□ 0.75
PTPRU-210ENST00000527027 SAP30BPQ9UHR5 308 aaKnown RBP19.71■□□□□ 0.75
PTPRU-210ENST00000527027 ATAD5Q96QE3 1844 aa19.7■□□□□ 0.74
PTPRU-210ENST00000527027 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
PTPRU-210ENST00000527027 ZKSCAN1P17029 563 aaPredicted RBP19.7■□□□□ 0.74
PTPRU-210ENST00000527027 DYNLL1P63167 89 aaKnown RBP19.7■□□□□ 0.74
PTPRU-210ENST00000527027 CACNB2Q08289 660 aaPredicted RBP19.7■□□□□ 0.74
PTPRU-210ENST00000527027 GPR142Q7Z601 462 aa19.7■□□□□ 0.74
PTPRU-210ENST00000527027 PORCNQ9H237 461 aa19.7■□□□□ 0.74
PTPRU-210ENST00000527027 PIH1D3Q9NQM4 214 aaKnown RBP19.7■□□□□ 0.74
PTPRU-210ENST00000527027 SYN1P17600 705 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 CYP7A1P22680 504 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 RGS2P41220 211 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 MORN1Q5T089 497 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 ZKSCAN2Q63HK3 967 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 GPR153Q6NV75 609 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 PLEKHH3Q7Z736 793 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 PAGR1Q9BTK6 254 aa19.69■□□□□ 0.74
PTPRU-210ENST00000527027 GH2P01242 217 aa19.68■□□□□ 0.74
PTPRU-210ENST00000527027 MAGEA10P43363 369 aaPredicted RBP19.68■□□□□ 0.74
PTPRU-210ENST00000527027 LHX8Q68G74 356 aa19.68■□□□□ 0.74
PTPRU-210ENST00000527027 POTEEQ6S8J3 1075 aa19.68■□□□□ 0.74
PTPRU-210ENST00000527027 CERS3Q8IU89 383 aa19.68■□□□□ 0.74
PTPRU-210ENST00000527027 DBNLQ9UJU6 430 aaKnown RBP19.68■□□□□ 0.74
PTPRU-210ENST00000527027 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
PTPRU-210ENST00000527027 SIPA1L1O43166 1804 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 COL6A1P12109 1028 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 CCL14Q16627 93 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 LRIT3Q3SXY7 679 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 TATDN1Q6P1N9 297 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 C12orf42Q96LP6 360 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 RABGAP1Q9Y3P9 1069 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 PFASO15067 1338 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 PLXNB2O15031 1838 aa19.67■□□□□ 0.74
PTPRU-210ENST00000527027 ALPK3Q96L96 1907 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L15C9J2P7 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L13C9JLJ4 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L11C9JVI0 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L18D6R9N7 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L22D6RA61 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L17D6RBQ6 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L19D6RCP7 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L20D6RJB6 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 DLL1O00548 723 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 IDH1O75874 414 aaKnown RBP19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP5P45974 858 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 USP17L24Q0WX57 530 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 MIGA1Q8NAN2 632 aa19.66■□□□□ 0.74
PTPRU-210ENST00000527027 CCDC8Q9H0W5 538 aaPredicted RBP19.66■□□□□ 0.74
PTPRU-210ENST00000527027 CWC22Q9HCG8 908 aaKnown RBP19.66■□□□□ 0.74
PTPRU-210ENST00000527027 CCND3P30281 292 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms