RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 SIPA1L1O43166 1804 aa18.38■□□□□ 0.53
LTBP3-206ENST00000526825 C19orf81C9J6K1 198 aa18.38■□□□□ 0.53
LTBP3-206ENST00000526825 TFRCP02786 760 aaKnown RBP18.38■□□□□ 0.53
LTBP3-206ENST00000526825 SHROOM1Q2M3G4 852 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-206ENST00000526825 P2RX7Q99572 595 aaKnown RBP18.38■□□□□ 0.53
LTBP3-206ENST00000526825 PRO3102Q9H379 93 aa18.38■□□□□ 0.53
LTBP3-206ENST00000526825 SZT2Q5T011 3432 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
LTBP3-206ENST00000526825 USP17L10C9JJH3 530 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 CYP7A1P22680 504 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 MTMR2Q13614 643 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 RBM27Q9P2N5 1060 aaKnown RBP18.37■□□□□ 0.53
LTBP3-206ENST00000526825 RCAN3Q9UKA8 241 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 TAOK2Q9UL54 1235 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 NR2E3Q9Y5X4 410 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 LOC285556D6RIA3 1793 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
LTBP3-206ENST00000526825 C20orf194Q5TEA3 1177 aa18.36■□□□□ 0.53
LTBP3-206ENST00000526825 CEP85Q6P2H3 762 aa18.36■□□□□ 0.53
LTBP3-206ENST00000526825 TMOD4Q9NZQ9 345 aa18.36■□□□□ 0.53
LTBP3-206ENST00000526825 SAP30BPQ9UHR5 308 aaKnown RBP18.36■□□□□ 0.53
LTBP3-206ENST00000526825 PEX10O60683 326 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 GDF11O95390 407 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 Q3C1V9 767 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 CRACR2BQ8N4Y2 399 aaPredicted RBP18.35■□□□□ 0.53
LTBP3-206ENST00000526825 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.35■□□□□ 0.53
LTBP3-206ENST00000526825 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 TXNRD2Q9NNW7 524 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 RBPJLQ9UBG7 517 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 ZBTB21Q9ULJ3 1066 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
LTBP3-206ENST00000526825 HMGCRP04035 888 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 HERVK_113P62684 666 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 IRX3P78415 501 aaPredicted RBP18.34■□□□□ 0.53
LTBP3-206ENST00000526825 TRIM32Q13049 653 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 TATDN1Q6P1N9 297 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 POTEEQ6S8J3 1075 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 PAWRQ96IZ0 340 aaKnown RBP18.34■□□□□ 0.53
LTBP3-206ENST00000526825 TRIM34Q9BYJ4 488 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 CDK5RAP2Q96SN8 1893 aa18.34■□□□□ 0.53
LTBP3-206ENST00000526825 RPTORQ8N122 1335 aa18.33■□□□□ 0.53
LTBP3-206ENST00000526825 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.52
LTBP3-206ENST00000526825 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.52
LTBP3-206ENST00000526825 MIGA1Q8NAN2 632 aa18.33■□□□□ 0.52
LTBP3-206ENST00000526825 GPRC5AQ8NFJ5 357 aa18.33■□□□□ 0.52
LTBP3-206ENST00000526825 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
LTBP3-206ENST00000526825 CERS3Q8IU89 383 aa18.32■□□□□ 0.52
LTBP3-206ENST00000526825 HMX1Q9NP08 348 aaPredicted RBP18.32■□□□□ 0.52
LTBP3-206ENST00000526825 EXOC6BQ9Y2D4 811 aa18.32■□□□□ 0.52
LTBP3-206ENST00000526825 FOCADQ5VW36 1801 aa18.32■□□□□ 0.52
LTBP3-206ENST00000526825 EVI5O60447 810 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 GH2P01242 217 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 XRCC5P13010 732 aaKnown RBP18.31■□□□□ 0.52
LTBP3-206ENST00000526825 CYP2B6P20813 491 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 MNX1P50219 401 aaPredicted RBP18.31■□□□□ 0.52
LTBP3-206ENST00000526825 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L2Q6R6M4 530 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 NECAB2Q7Z6G3 386 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 ANKLE1Q8NAG6 615 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 DIS3LQ8TF46 1054 aaKnown RBP18.31■□□□□ 0.52
LTBP3-206ENST00000526825 TRIB2Q92519 343 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 USP6NLQ92738 828 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 EHD4Q9H223 541 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 MAST2Q6P0Q8 1798 aa18.31■□□□□ 0.52
LTBP3-206ENST00000526825 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 USP5P45974 858 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 ERVK-24P63145 666 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 MAP3K12Q12852 859 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 AACSQ86V21 672 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 ERC1Q8IUD2 1116 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 C12orf42Q96LP6 360 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 RIOK1Q9BRS2 568 aaKnown RBP18.3■□□□□ 0.52
LTBP3-206ENST00000526825 SERPINB13Q9UIV8 391 aa18.3■□□□□ 0.52
LTBP3-206ENST00000526825 MAPK4P31152 587 aa18.29■□□□□ 0.52
LTBP3-206ENST00000526825 TTC6Q86TZ1 520 aa18.29■□□□□ 0.52
LTBP3-206ENST00000526825 RHPN1Q8TCX5 695 aa18.29■□□□□ 0.52
LTBP3-206ENST00000526825 GTF3C2Q8WUA4 911 aaPredicted RBP18.29■□□□□ 0.52
LTBP3-206ENST00000526825 PORCNQ9H237 461 aa18.29■□□□□ 0.52
LTBP3-206ENST00000526825 OGDHLQ9ULD0 1010 aa18.29■□□□□ 0.52
LTBP3-206ENST00000526825 MYH1P12882 1939 aa18.28■□□□□ 0.52
LTBP3-206ENST00000526825 PLCD1P51178 756 aa18.28■□□□□ 0.52
LTBP3-206ENST00000526825 MORN1Q5T089 497 aa18.28■□□□□ 0.52
LTBP3-206ENST00000526825 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
LTBP3-206ENST00000526825 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L15C9J2P7 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L11C9JVI0 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L18D6R9N7 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L22D6RA61 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L17D6RBQ6 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L19D6RCP7 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 USP17L20D6RJB6 530 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 APBB1O00213 710 aa18.27■□□□□ 0.52
LTBP3-206ENST00000526825 CNMDO75829 334 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms