RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 PROCA1Q8NCQ7 364 aaPredicted RBP16.23■□□□□ 0.19
USH1C-203ENST00000526181 GPATCH3Q96I76 525 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 WDR18Q9BV38 432 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 AS3MTQ9HBK9 375 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
USH1C-203ENST00000526181 SLC45A1Q9Y2W3 748 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 PTCH2Q9Y6C5 1203 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 MYH1P12882 1939 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 SHMT1P34896 483 aa16.22■□□□□ 0.19
USH1C-203ENST00000526181 KIF22Q14807 665 aa16.22■□□□□ 0.19
USH1C-203ENST00000526181 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
USH1C-203ENST00000526181 SH3D19Q5HYK7 790 aa16.22■□□□□ 0.19
USH1C-203ENST00000526181 TRIM47Q96LD4 638 aa16.22■□□□□ 0.19
USH1C-203ENST00000526181 TBC1D2Q9BYX2 928 aa16.22■□□□□ 0.19
USH1C-203ENST00000526181 PUS7LQ9H0K6 701 aaKnown RBP16.22■□□□□ 0.19
USH1C-203ENST00000526181 SMIM22K7EJ46 135 aa16.21■□□□□ 0.19
USH1C-203ENST00000526181 PSMC4P43686 418 aa16.21■□□□□ 0.19
USH1C-203ENST00000526181 GABPAQ06546 454 aa16.21■□□□□ 0.19
USH1C-203ENST00000526181 KBTBD3Q8NAB2 608 aa16.21■□□□□ 0.19
USH1C-203ENST00000526181 PI4K2BQ8TCG2 481 aa16.21■□□□□ 0.19
USH1C-203ENST00000526181 SMCR8Q8TEV9 937 aaPredicted RBP16.21■□□□□ 0.19
USH1C-203ENST00000526181 CYP2D7A0A087X1C5 515 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 BACE1P56817 501 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 MLLT1Q03111 559 aaPredicted RBP16.2■□□□□ 0.18
USH1C-203ENST00000526181 HDAC1Q13547 482 aaPredicted RBP16.2■□□□□ 0.18
USH1C-203ENST00000526181 ARHGEF6Q15052 776 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 ABCB5Q2M3G0 1257 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
USH1C-203ENST00000526181 ZSCAN25Q6NSZ9 544 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 SLC44A5Q8NCS7 719 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 DYNLL2Q96FJ2 89 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 GINM1Q9NU53 330 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 SLC4A4Q9Y6R1 1079 aa16.2■□□□□ 0.18
USH1C-203ENST00000526181 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
USH1C-203ENST00000526181 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
USH1C-203ENST00000526181 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
USH1C-203ENST00000526181 MX1P20591 662 aa16.19■□□□□ 0.18
USH1C-203ENST00000526181 OSBPP22059 807 aa16.19■□□□□ 0.18
USH1C-203ENST00000526181 RAB3GAP1Q15042 981 aa16.19■□□□□ 0.18
USH1C-203ENST00000526181 ZYXQ15942 572 aaKnown RBP16.19■□□□□ 0.18
USH1C-203ENST00000526181 ANKRD45Q5TZF3 282 aa16.19■□□□□ 0.18
USH1C-203ENST00000526181 ANKRD13CQ8N6S4 541 aa16.19■□□□□ 0.18
USH1C-203ENST00000526181 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 GUCY1A2P33402 732 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 SH3TC2Q8TF17 1288 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 ARMC5Q96C12 935 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 ASCC2Q9H1I8 757 aaPredicted RBP16.18■□□□□ 0.18
USH1C-203ENST00000526181 EMILIN3Q9NT22 766 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 ATP8A2Q9NTI2 1148 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 PNMA3Q9UL41 463 aa16.18■□□□□ 0.18
USH1C-203ENST00000526181 MYH7P12883 1935 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 C19orf81C9J6K1 198 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 USP17L21D6R901 530 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 RNF113AO15541 343 aaKnown RBP16.17■□□□□ 0.18
USH1C-203ENST00000526181 PEX10O60683 326 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 MYCP01106 439 aaPredicted RBP16.17■□□□□ 0.18
USH1C-203ENST00000526181 GNRH1P01148 92 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 FCGRTP55899 365 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 PRKCZQ05513 592 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 ACER1Q8TDN7 264 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 GCC1Q96CN9 775 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 STRBPQ96SI9 672 aaKnown RBP16.17■□□□□ 0.18
USH1C-203ENST00000526181 SRRDQ9UH36 339 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 SUPT16HQ9Y5B9 1047 aaKnown RBP16.17■□□□□ 0.18
USH1C-203ENST00000526181 MYPNQ86TC9 1320 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 HTTP42858 3142 aa16.17■□□□□ 0.18
USH1C-203ENST00000526181 POTEFA5A3E0 1075 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 M0R2C6 588 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 MPHOSPH10O00566 681 aaKnown RBP16.16■□□□□ 0.18
USH1C-203ENST00000526181 ERC2O15083 957 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 GLRX3O76003 335 aaKnown RBP16.16■□□□□ 0.18
USH1C-203ENST00000526181 PABPC4Q13310 644 aaKnown RBP eCLIP16.16■□□□□ 0.18
USH1C-203ENST00000526181 SEPT2Q15019 361 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 C12orf60Q5U649 245 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 APPBP2Q92624 585 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 ZNF333Q96JL9 665 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 FEZ1Q99689 392 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 GABRQQ9UN88 632 aa16.16■□□□□ 0.18
USH1C-203ENST00000526181 IGHDP01880 384 aa16.15■□□□□ 0.18
USH1C-203ENST00000526181 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
USH1C-203ENST00000526181 USP17L2Q6R6M4 530 aa16.15■□□□□ 0.18
USH1C-203ENST00000526181 CLEC10AQ8IUN9 316 aa16.15■□□□□ 0.18
USH1C-203ENST00000526181 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
USH1C-203ENST00000526181 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
USH1C-203ENST00000526181 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
USH1C-203ENST00000526181 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
USH1C-203ENST00000526181 A0A1W2PRG0 241 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 GSG1L2A8MUP6 293 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 TNPO2O14787 897 aaKnown RBP16.14■□□□□ 0.17
USH1C-203ENST00000526181 GPAA1O43292 621 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 AKR1B1P15121 316 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 HOXA7P31268 230 aaPredicted RBP16.14■□□□□ 0.17
USH1C-203ENST00000526181 PRMT2P55345 433 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms