RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 NMIQ13287 307 aaPredicted RBP20.66■□□□□ 0.9
LMX1B-203ENST00000526117 C16orf86Q6ZW13 317 aa20.66■□□□□ 0.9
LMX1B-203ENST00000526117 IFNL1Q8IU54 200 aa20.66■□□□□ 0.9
LMX1B-203ENST00000526117 ALX1Q15699 326 aa20.65■□□□□ 0.9
LMX1B-203ENST00000526117 NOM1Q5C9Z4 860 aaKnown RBP20.65■□□□□ 0.9
LMX1B-203ENST00000526117 IFNL3Q8IZI9 196 aa20.65■□□□□ 0.9
LMX1B-203ENST00000526117 WDR18Q9BV38 432 aa20.65■□□□□ 0.9
LMX1B-203ENST00000526117 RNF186Q9NXI6 227 aa20.65■□□□□ 0.9
LMX1B-203ENST00000526117 ZHX2Q9Y6X8 837 aa20.65■□□□□ 0.9
LMX1B-203ENST00000526117 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 A0A0G2JLL6 359 aaPredicted RBP20.64■□□□□ 0.89
LMX1B-203ENST00000526117 USP17L5A8MUK1 530 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 FOXN1O15353 648 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 CYP2D6P10635 497 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 CTCFP49711 727 aaPredicted RBP20.64■□□□□ 0.89
LMX1B-203ENST00000526117 SLC4A8Q2Y0W8 1093 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 CERKLQ49MI3 558 aaPredicted RBP20.64■□□□□ 0.89
LMX1B-203ENST00000526117 OTUD7BQ6GQQ9 843 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 PRRT2Q7Z6L0 340 aaPredicted RBP20.64■□□□□ 0.89
LMX1B-203ENST00000526117 BRI3BPQ8WY22 251 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 DIAPH3Q9NSV4 1193 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 ZBTB21Q9ULJ3 1066 aa20.64■□□□□ 0.89
LMX1B-203ENST00000526117 PTPRFP10586 1907 aa20.63■□□□□ 0.89
LMX1B-203ENST00000526117 RAD50Q92878 1312 aa20.63■□□□□ 0.89
LMX1B-203ENST00000526117 TDO2P48775 406 aa20.63■□□□□ 0.89
LMX1B-203ENST00000526117 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
LMX1B-203ENST00000526117 CCDC17Q96LX7 622 aa20.63■□□□□ 0.89
LMX1B-203ENST00000526117 PTPN18Q99952 460 aa20.63■□□□□ 0.89
LMX1B-203ENST00000526117 AS3MTQ9HBK9 375 aa20.63■□□□□ 0.89
LMX1B-203ENST00000526117 CCL15-CCL14A0A0B4J2E2 113 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 IGF2BP3O00425 579 aaKnown RBP eCLIP20.62■□□□□ 0.89
LMX1B-203ENST00000526117 APPP05067 770 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 MOGSQ13724 837 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 CCL15Q16663 113 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 CCDC129Q6ZRS4 1044 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 ZNF589Q86UQ0 364 aaPredicted RBP20.62■□□□□ 0.89
LMX1B-203ENST00000526117 ZNF280CQ8ND82 737 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 NAPBQ9H115 298 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 LOC285556D6RIA3 1793 aa20.62■□□□□ 0.89
LMX1B-203ENST00000526117 CYP2D7A0A087X1C5 515 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 HSPA8P11142 646 aaKnown RBP20.61■□□□□ 0.89
LMX1B-203ENST00000526117 CDK8P49336 464 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 JAG1P78504 1218 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 EVX2Q03828 476 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 ABCB5Q2M3G0 1257 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 SH3D19Q5HYK7 790 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 FASTKD5Q7L8L6 764 aaKnown RBP20.61■□□□□ 0.89
LMX1B-203ENST00000526117 ANKRD23Q86SG2 305 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 ZNF287Q9HBT7 754 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 PRDM10Q9NQV6 1147 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 ANAPC4Q9UJX5 808 aa20.61■□□□□ 0.89
LMX1B-203ENST00000526117 GDF11O95390 407 aa20.6■□□□□ 0.89
LMX1B-203ENST00000526117 GH2P01242 217 aa20.6■□□□□ 0.89
LMX1B-203ENST00000526117 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
LMX1B-203ENST00000526117 PROCA1Q8NCQ7 364 aaPredicted RBP20.6■□□□□ 0.89
LMX1B-203ENST00000526117 DYNLL2Q96FJ2 89 aa20.6■□□□□ 0.89
LMX1B-203ENST00000526117 CABP5Q9NP86 173 aa20.6■□□□□ 0.89
LMX1B-203ENST00000526117 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.6■□□□□ 0.89
LMX1B-203ENST00000526117 SLC45A1Q9Y2W3 748 aa20.6■□□□□ 0.89
LMX1B-203ENST00000526117 MYH8P13535 1937 aa20.6■□□□□ 0.89
LMX1B-203ENST00000526117 TRPA1O75762 1119 aa20.59■□□□□ 0.89
LMX1B-203ENST00000526117 CHMLP26374 656 aa20.59■□□□□ 0.89
LMX1B-203ENST00000526117 COL13A1Q5TAT6 717 aaPredicted RBP20.59■□□□□ 0.89
LMX1B-203ENST00000526117 VPS53Q5VIR6 699 aa20.59■□□□□ 0.89
LMX1B-203ENST00000526117 CWC27Q6UX04 472 aaKnown RBP20.59■□□□□ 0.89
LMX1B-203ENST00000526117 TMEM179Q6ZVK1 233 aa20.59■□□□□ 0.89
LMX1B-203ENST00000526117 SLC44A5Q8NCS7 719 aa20.59■□□□□ 0.89
LMX1B-203ENST00000526117 RUFY2Q8WXA3 655 aa20.59■□□□□ 0.89
LMX1B-203ENST00000526117 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.59■□□□□ 0.89
LMX1B-203ENST00000526117 GREB1LQ9C091 1923 aaPredicted RBP20.59■□□□□ 0.89
LMX1B-203ENST00000526117 BTBD19C9JJ37 291 aa20.58■□□□□ 0.89
LMX1B-203ENST00000526117 DSCC1Q9BVC3 393 aa20.58■□□□□ 0.89
LMX1B-203ENST00000526117 MINDY4BA8MYZ0 360 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 C19orf81C9J6K1 198 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 SMIM22K7EJ46 135 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 FGAP02671 866 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 SLC3A2P08195 630 aaKnown RBP20.57■□□□□ 0.88
LMX1B-203ENST00000526117 GUCY1A2P33402 732 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 BACE1P56817 501 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 PPARAQ07869 468 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 SPP2Q13103 211 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 SHROOM1Q2M3G4 852 aaPredicted RBP20.57■□□□□ 0.88
LMX1B-203ENST00000526117 GPAT2Q6NUI2 795 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 FAM43AQ8N2R8 423 aa20.57■□□□□ 0.88
LMX1B-203ENST00000526117 TRIM75PA6NK02 468 aa20.56■□□□□ 0.88
LMX1B-203ENST00000526117 USP17L10C9JJH3 530 aa20.56■□□□□ 0.88
LMX1B-203ENST00000526117 FGRP09769 529 aa20.56■□□□□ 0.88
LMX1B-203ENST00000526117 PDE4BQ07343 736 aa20.56■□□□□ 0.88
LMX1B-203ENST00000526117 CCDC84Q86UT8 332 aaPredicted RBP20.56■□□□□ 0.88
LMX1B-203ENST00000526117 PLIN4Q96Q06 1357 aa20.56■□□□□ 0.88
LMX1B-203ENST00000526117 LAMA4Q16363 1823 aa20.55■□□□□ 0.88
LMX1B-203ENST00000526117 PCP11498 1178 aaKnown RBP20.55■□□□□ 0.88
LMX1B-203ENST00000526117 RASA1P20936 1047 aa20.55■□□□□ 0.88
LMX1B-203ENST00000526117 NT5C2P49902 561 aa20.55■□□□□ 0.88
LMX1B-203ENST00000526117 C12orf42Q96LP6 360 aa20.55■□□□□ 0.88
LMX1B-203ENST00000526117 KIAA1683Q9H0B3 1180 aa20.55■□□□□ 0.88
LMX1B-203ENST00000526117 AGTPBP1Q9UPW5 1226 aa20.55■□□□□ 0.88
LMX1B-203ENST00000526117 SGSM2O43147 1006 aa20.54■□□□□ 0.88
LMX1B-203ENST00000526117 AKR1B1P15121 316 aa20.54■□□□□ 0.88
LMX1B-203ENST00000526117 LBX1P52954 281 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms