RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 JAG1P78504 1218 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 SHROOM1Q2M3G4 852 aaPredicted RBP15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 Q3C1V9 767 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 GPR142Q7Z601 462 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 TEX11Q8IYF3 940 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 TRMT44Q8IYL2 757 aaKnown RBP15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 NSUN4Q96CB9 384 aaKnown RBP15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 APBA2Q99767 749 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 WDR18Q9BV38 432 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 COPRSQ9NQ92 184 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 RBPJLQ9UBG7 517 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 HERC5Q9UII4 1024 aaKnown RBP15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 CDH23Q9H251 3354 aa15.44■□□□□ 0.06
CCDC90B-205ENST00000525916 RGS2P41220 211 aa15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 MVPQ14764 893 aaKnown RBP15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 MORN1Q5T089 497 aa15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 ZNF697Q5TEC3 545 aa15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 SH3RF3Q8TEJ3 882 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 LBHD1Q9BQE6 289 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 SENP6Q9GZR1 1112 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 DNAJC18Q9H819 358 aa15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 HMG20BQ9P0W2 317 aa15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.43■□□□□ 0.06
CCDC90B-205ENST00000525916 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 LDHCP07864 332 aa15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 ASNSP08243 561 aa15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 GSTO1P78417 241 aa15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 TFCP2Q12800 502 aa15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 POTEEQ6S8J3 1075 aa15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 PLEKHH3Q7Z736 793 aa15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 CCAR1Q8IX12 1150 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 RAI14Q9P0K7 980 aa15.42■□□□□ 0.06
CCDC90B-205ENST00000525916 USP17L10C9JJH3 530 aa15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 GDF11O95390 407 aa15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 ATN1P54259 1190 aaPredicted RBP15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 SPATA5Q8NB90 893 aa15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 FLRT1Q9NZU1 646 aa15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 PI4KBQ9UBF8 816 aa15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 SPTBN5Q9NRC6 3674 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 ZNFX1Q9P2E3 1918 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-205ENST00000525916 C19orf81C9J6K1 198 aa15.4■□□□□ 0.06
CCDC90B-205ENST00000525916 NEUROD6Q96NK8 337 aa15.4■□□□□ 0.06
CCDC90B-205ENST00000525916 CWC22Q9HCG8 908 aaKnown RBP15.4■□□□□ 0.06
CCDC90B-205ENST00000525916 AKAP2Q9Y2D5 859 aa15.4■□□□□ 0.06
CCDC90B-205ENST00000525916 NDUFB9Q9Y6M9 179 aa15.4■□□□□ 0.06
CCDC90B-205ENST00000525916 SMCHD1A6NHR9 2005 aa15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 ZNF236Q9UL36 1845 aa15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 MAP2K5Q13163 448 aa15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 MAFAQ8NHW3 353 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 CDX2Q99626 313 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 MEIS3Q99687 375 aa15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 DHX36Q9H2U1 1008 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 AATFQ9NY61 560 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 ZBTB21Q9ULJ3 1066 aa15.39■□□□□ 0.05
CCDC90B-205ENST00000525916 CNMDO75829 334 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 ARID4AP29374 1257 aaPredicted RBP15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 CNGA1P29973 690 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 MCAMP43121 646 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 RTP1P59025 263 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 WDR78Q5VTH9 848 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 MFSD14CQ5VZR4 134 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 MAPKAPK5Q8IW41 473 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 CRACR2BQ8N4Y2 399 aaPredicted RBP15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 TGFBRAP1Q8WUH2 860 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 NOL10Q9BSC4 688 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 PRKAG2Q9UGJ0 569 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 DDX20Q9UHI6 824 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 FLT1P17948 1338 aa15.38■□□□□ 0.05
CCDC90B-205ENST00000525916 MYH8P13535 1937 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 E9PSI1 815 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 SHHQ15465 462 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 ZYXQ15942 572 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 C9orf50Q5SZB4 431 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 GORABQ5T7V8 394 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 MYLIPQ8WY64 445 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 LPAR1Q92633 364 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 EDC3Q96F86 508 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 TRIM34Q9BYJ4 488 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 PALD1Q9ULE6 856 aa15.37■□□□□ 0.05
CCDC90B-205ENST00000525916 DNM1LO00429 736 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 USP17L2Q6R6M4 530 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 NPLOC4Q8TAT6 608 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 SEMA6BQ9H3T3 888 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 PRDM6Q9NQX0 595 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 SAP30BPQ9UHR5 308 aaKnown RBP15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 NOB1Q9ULX3 412 aaKnown RBP15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 HDAC5Q9UQL6 1122 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 ATP11BQ9Y2G3 1177 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 RABGAP1Q9Y3P9 1069 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 A0A0G2JMZ2 1700 aa15.36■□□□□ 0.05
CCDC90B-205ENST00000525916 PARP14Q460N5 1801 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms