RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 TRMT44Q8IYL2 757 aaKnown RBP18.12■□□□□ 0.49
CSTF3-204ENST00000524556 TDHQ8IZJ6 230 aa18.12■□□□□ 0.49
CSTF3-204ENST00000524556 SOCS4Q8WXH5 440 aa18.12■□□□□ 0.49
CSTF3-204ENST00000524556 NOL10Q9BSC4 688 aaKnown RBP18.12■□□□□ 0.49
CSTF3-204ENST00000524556 PFASO15067 1338 aa18.12■□□□□ 0.49
CSTF3-204ENST00000524556 FOCADQ5VW36 1801 aa18.12■□□□□ 0.49
CSTF3-204ENST00000524556 UNC80Q8N2C7 3258 aa18.11■□□□□ 0.49
CSTF3-204ENST00000524556 BAG3O95817 575 aa18.11■□□□□ 0.49
CSTF3-204ENST00000524556 UQCRFS1P1P0C7P4 283 aa18.11■□□□□ 0.49
CSTF3-204ENST00000524556 Q7L0L9 218 aa18.11■□□□□ 0.49
CSTF3-204ENST00000524556 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
CSTF3-204ENST00000524556 FOXP4Q8IVH2 680 aaPredicted RBP18.11■□□□□ 0.49
CSTF3-204ENST00000524556 ARHGAP45Q92619 1136 aa18.11■□□□□ 0.49
CSTF3-204ENST00000524556 RBPJLQ9UBG7 517 aa18.11■□□□□ 0.49
CSTF3-204ENST00000524556 COL6A1P12109 1028 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 PLCG2P16885 1265 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 MAPK4P31152 587 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 PPP4CP60510 307 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 CACNB2Q08289 660 aaPredicted RBP18.1■□□□□ 0.49
CSTF3-204ENST00000524556 PDE3AQ14432 1141 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 Q3C1V9 767 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 TGFBRAP1Q8WUH2 860 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 USP6NLQ92738 828 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
CSTF3-204ENST00000524556 DNAJC18Q9H819 358 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 GINM1Q9NU53 330 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 AATFQ9NY61 560 aaKnown RBP eCLIP18.1■□□□□ 0.49
CSTF3-204ENST00000524556 STXBP5LQ9Y2K9 1186 aa18.1■□□□□ 0.49
CSTF3-204ENST00000524556 USP17L10C9JJH3 530 aa18.09■□□□□ 0.49
CSTF3-204ENST00000524556 ZKSCAN1P17029 563 aaPredicted RBP18.09■□□□□ 0.49
CSTF3-204ENST00000524556 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
CSTF3-204ENST00000524556 ERVK-9P63128 1117 aa18.09■□□□□ 0.49
CSTF3-204ENST00000524556 ERVK-24P63145 666 aa18.09■□□□□ 0.49
CSTF3-204ENST00000524556 G3BP1Q13283 466 aaKnown RBP eCLIP18.09■□□□□ 0.49
CSTF3-204ENST00000524556 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
CSTF3-204ENST00000524556 MAPKAPK5Q8IW41 473 aa18.09■□□□□ 0.49
CSTF3-204ENST00000524556 MTMR10Q9NXD2 777 aa18.09■□□□□ 0.49
CSTF3-204ENST00000524556 MYO5AQ9Y4I1 1855 aaKnown RBP18.09■□□□□ 0.49
CSTF3-204ENST00000524556 MAST2Q6P0Q8 1798 aa18.09■□□□□ 0.49
CSTF3-204ENST00000524556 FLT1P17948 1338 aa18.08■□□□□ 0.49
CSTF3-204ENST00000524556 SHROOM1Q2M3G4 852 aaPredicted RBP18.08■□□□□ 0.48
CSTF3-204ENST00000524556 MORN1Q5T089 497 aa18.08■□□□□ 0.48
CSTF3-204ENST00000524556 LHX8Q68G74 356 aa18.08■□□□□ 0.48
CSTF3-204ENST00000524556 CRACR2BQ8N4Y2 399 aaPredicted RBP18.08■□□□□ 0.48
CSTF3-204ENST00000524556 GTF3C2Q8WUA4 911 aaPredicted RBP18.08■□□□□ 0.48
CSTF3-204ENST00000524556 PORCNQ9H237 461 aa18.08■□□□□ 0.48
CSTF3-204ENST00000524556 SNRKQ9NRH2 765 aa18.08■□□□□ 0.48
CSTF3-204ENST00000524556 GDF11O95390 407 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 GNAI2P04899 355 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 CCND3P30281 292 aaPredicted RBP18.07■□□□□ 0.48
CSTF3-204ENST00000524556 RGS2P41220 211 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 CCL14Q16627 93 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 POTEEQ6S8J3 1075 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 GPR142Q7Z601 462 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 PLEKHH3Q7Z736 793 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 ADGRA1Q86SQ6 560 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
CSTF3-204ENST00000524556 TRIM34Q9BYJ4 488 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 PALD1Q9ULE6 856 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
CSTF3-204ENST00000524556 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
CSTF3-204ENST00000524556 LRRC26Q2I0M4 334 aa18.06■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
CSTF3-204ENST00000524556 PAGR1Q9BTK6 254 aa18.06■□□□□ 0.48
CSTF3-204ENST00000524556 FRMPD3Q5JV73 1810 aa18.06■□□□□ 0.48
CSTF3-204ENST00000524556 TTC39AQ5SRH9 613 aa18.05■□□□□ 0.48
CSTF3-204ENST00000524556 APBA2Q99767 749 aa18.05■□□□□ 0.48
CSTF3-204ENST00000524556 GPR108Q9NPR9 543 aa18.05■□□□□ 0.48
CSTF3-204ENST00000524556 MYH1P12882 1939 aa18.05■□□□□ 0.48
CSTF3-204ENST00000524556 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
CSTF3-204ENST00000524556 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
CSTF3-204ENST00000524556 SAP30BPQ9UHR5 308 aaKnown RBP18.04■□□□□ 0.48
CSTF3-204ENST00000524556 IGSF3O75054 1194 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 HLA-DOAP06340 250 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 MDM2Q00987 491 aaPredicted RBP18.03■□□□□ 0.48
CSTF3-204ENST00000524556 MAP2K5Q13163 448 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 ATF7IPQ6VMQ6 1270 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 EDC3Q96F86 508 aaKnown RBP18.03■□□□□ 0.48
CSTF3-204ENST00000524556 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
CSTF3-204ENST00000524556 RABGAP1Q9Y3P9 1069 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 IPO8O15397 1037 aaKnown RBP18.02■□□□□ 0.48
CSTF3-204ENST00000524556 CNMDO75829 334 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 GLRX3O76003 335 aaKnown RBP18.02■□□□□ 0.48
CSTF3-204ENST00000524556 GH2P01242 217 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 USP17L24Q0WX57 530 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 ZNF512BQ96KM6 892 aaPredicted RBP18.02■□□□□ 0.48
CSTF3-204ENST00000524556 C12orf42Q96LP6 360 aa18.02■□□□□ 0.48
CSTF3-204ENST00000524556 TRIM27P14373 513 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms