RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 CACNB2Q08289 660 aaPredicted RBP11.76□□□□□ -0.53
MMP3-203ENST00000524478 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
MMP3-203ENST00000524478 FAM109BQ6ICB4 259 aaPredicted RBP11.76□□□□□ -0.53
MMP3-203ENST00000524478 SOCS4Q8WXH5 440 aa11.76□□□□□ -0.53
MMP3-203ENST00000524478 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
MMP3-203ENST00000524478 FAM161BQ96MY7 647 aa11.76□□□□□ -0.53
MMP3-203ENST00000524478 PORCNQ9H237 461 aa11.76□□□□□ -0.53
MMP3-203ENST00000524478 DNAJC18Q9H819 358 aa11.76□□□□□ -0.53
MMP3-203ENST00000524478 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
MMP3-203ENST00000524478 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.76□□□□□ -0.53
MMP3-203ENST00000524478 XRCC5P13010 732 aaKnown RBP11.75□□□□□ -0.53
MMP3-203ENST00000524478 ZKSCAN1P17029 563 aaPredicted RBP11.75□□□□□ -0.53
MMP3-203ENST00000524478 CAP2P40123 477 aa11.75□□□□□ -0.53
MMP3-203ENST00000524478 HERVK_113P62684 666 aa11.75□□□□□ -0.53
MMP3-203ENST00000524478 ZGPATQ8N5A5 531 aaKnown RBP11.75□□□□□ -0.53
MMP3-203ENST00000524478 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
MMP3-203ENST00000524478 CEP126Q9P2H0 1117 aa11.75□□□□□ -0.53
MMP3-203ENST00000524478 ABCF2Q9UG63 623 aa11.75□□□□□ -0.53
MMP3-203ENST00000524478 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
MMP3-203ENST00000524478 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
MMP3-203ENST00000524478 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
MMP3-203ENST00000524478 PARP14Q460N5 1801 aa11.74□□□□□ -0.53
MMP3-203ENST00000524478 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
MMP3-203ENST00000524478 PABPC4Q13310 644 aaKnown RBP eCLIP11.74□□□□□ -0.53
MMP3-203ENST00000524478 MORN1Q5T089 497 aa11.74□□□□□ -0.53
MMP3-203ENST00000524478 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
MMP3-203ENST00000524478 APBA2Q99767 749 aa11.74□□□□□ -0.53
MMP3-203ENST00000524478 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
MMP3-203ENST00000524478 HOXA7P31268 230 aaPredicted RBP11.73□□□□□ -0.53
MMP3-203ENST00000524478 IL15P40933 162 aaPredicted RBP11.73□□□□□ -0.53
MMP3-203ENST00000524478 MYO9BQ13459 2157 aa11.73□□□□□ -0.53
MMP3-203ENST00000524478 GPR142Q7Z601 462 aa11.73□□□□□ -0.53
MMP3-203ENST00000524478 NSUN4Q96CB9 384 aaKnown RBP11.73□□□□□ -0.53
MMP3-203ENST00000524478 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
MMP3-203ENST00000524478 WDR18Q9BV38 432 aa11.73□□□□□ -0.53
MMP3-203ENST00000524478 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
MMP3-203ENST00000524478 FLRT1Q9NZU1 646 aa11.73□□□□□ -0.53
MMP3-203ENST00000524478 NAV1Q8NEY1 1877 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 BACE1P56817 501 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 ERVK-9P63128 1117 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 ERVK-24P63145 666 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 Q3C1V9 767 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 TBC1D9Q6ZT07 1266 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 COPRSQ9NQ92 184 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 TRANK1O15050 2925 aa11.72□□□□□ -0.53
MMP3-203ENST00000524478 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 CNMDO75829 334 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 GDF11O95390 407 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
MMP3-203ENST00000524478 MAPK4P31152 587 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 RGS2P41220 211 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 TIMM10P62072 90 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 PDE3AQ14432 1141 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 ERICH6Q7L0X2 663 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 SLF2Q8IX21 1173 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 GPRC5AQ8NFJ5 357 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 MAFAQ8NHW3 353 aaPredicted RBP11.71□□□□□ -0.53
MMP3-203ENST00000524478 SH3RF3Q8TEJ3 882 aaPredicted RBP11.71□□□□□ -0.53
MMP3-203ENST00000524478 XAGE2Q96GT9 111 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.53
MMP3-203ENST00000524478 HMG20BQ9P0W2 317 aa11.71□□□□□ -0.53
MMP3-203ENST00000524478 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.53
MMP3-203ENST00000524478 FLT1P17948 1338 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 RTP1P59025 263 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 SPTY2D1Q68D10 685 aaPredicted RBP11.7□□□□□ -0.54
MMP3-203ENST00000524478 ADGRA1Q86SQ6 560 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 TEX11Q8IYF3 940 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 MEIS3Q99687 375 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 PAGR1Q9BTK6 254 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 TTYH1Q9H313 450 aaPredicted RBP11.7□□□□□ -0.54
MMP3-203ENST00000524478 AS3MTQ9HBK9 375 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 ZBTB21Q9ULJ3 1066 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
MMP3-203ENST00000524478 COL11A1P12107 1806 aaPredicted RBP11.7□□□□□ -0.54
MMP3-203ENST00000524478 MYH8P13535 1937 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 IGHA2P01877 340 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 ASNSP08243 561 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 CT47B1P0C2W7 299 aaPredicted RBP11.69□□□□□ -0.54
MMP3-203ENST00000524478 ARID4AP29374 1257 aaPredicted RBP11.69□□□□□ -0.54
MMP3-203ENST00000524478 MCAMP43121 646 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
MMP3-203ENST00000524478 TFCP2Q12800 502 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 PLEKHH3Q7Z736 793 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 TRMT44Q8IYL2 757 aaKnown RBP11.69□□□□□ -0.54
MMP3-203ENST00000524478 MYLIPQ8WY64 445 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
MMP3-203ENST00000524478 PRDM6Q9NQX0 595 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
MMP3-203ENST00000524478 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
MMP3-203ENST00000524478 MAP4K4O95819 1239 aaPredicted RBP11.68□□□□□ -0.54
MMP3-203ENST00000524478 CYBAP13498 195 aa11.68□□□□□ -0.54
MMP3-203ENST00000524478 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
MMP3-203ENST00000524478 MAP2K5Q13163 448 aa11.68□□□□□ -0.54
MMP3-203ENST00000524478 MVPQ14764 893 aaKnown RBP11.68□□□□□ -0.54
MMP3-203ENST00000524478 SHHQ15465 462 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms