RNA–Protein interactions for RNA: ENST00000524257.5

PTK2-256, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-256	ENST00000524257	PUS7L	Q9H0K6	701 aa	Known RBP	12.84	□□□□□ -0.35
PTK2-256	ENST00000524257	DCP1A	Q9NPI6	582 aa	Predicted RBP	12.84	□□□□□ -0.35
PTK2-256	ENST00000524257	GINM1	Q9NU53	330 aa		12.84	□□□□□ -0.35
PTK2-256	ENST00000524257	CPA4	Q9UI42	421 aa		12.84	□□□□□ -0.35
PTK2-256	ENST00000524257	ZBTB21	Q9ULJ3	1066 aa		12.84	□□□□□ -0.35
PTK2-256	ENST00000524257	ADGRA2	Q96PE1	1338 aa		12.84	□□□□□ -0.35
PTK2-256	ENST00000524257	GLRX3	O76003	335 aa	Known RBP	12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	CYP2C8	P10632	490 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	KIF22	Q14807	665 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	TREML2	Q5T2D2	321 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	TATDN1	Q6P1N9	297 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	C17orf99	Q6UX52	265 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	WDR18	Q9BV38	432 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	RWDD1	Q9H446	243 aa	Predicted RBP	12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	ATP8A2	Q9NTI2	1148 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	AGTPBP1	Q9UPW5	1226 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	SLC45A1	Q9Y2W3	748 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	MYH8	P13535	1937 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	SALL3	Q9BXA9	1300 aa		12.83	□□□□□ -0.36
PTK2-256	ENST00000524257	RNF113A	O15541	343 aa	Known RBP	12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	GH2	P01242	217 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	CYP2D6	P10635	497 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	SHMT1	P34896	483 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	LACTB	P83111	547 aa	Predicted RBP	12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	EVX2	Q03828	476 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	GABPA	Q06546	454 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	MTMR2	Q13614	643 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	ARHGEF6	Q15052	776 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	CERKL	Q49MI3	558 aa	Predicted RBP	12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	SH3D19	Q5HYK7	790 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	ARHGAP39	Q9C0H5	1083 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	PTPN22	Q9Y2R2	807 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	SLC4A4	Q9Y6R1	1079 aa		12.82	□□□□□ -0.36
PTK2-256	ENST00000524257	USP17L10	C9JJH3	530 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	ECM2	O94769	699 aa	Predicted RBP	12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	ZFY	P08048	801 aa	Predicted RBP	12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	BACE1	P56817	501 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	ABCB5	Q2M3G0	1257 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	APPBP2	Q92624	585 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	OSBP2	Q969R2	916 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	DDRGK1	Q96HY6	314 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	CABP5	Q9NP86	173 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	TMOD4	Q9NZQ9	345 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	PNMA3	Q9UL41	463 aa		12.81	□□□□□ -0.36
PTK2-256	ENST00000524257	MGAM	O43451	1857 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	C19orf81	C9J6K1	198 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	IGHD	P01880	384 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	BCR	P11274	1271 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	RAB3GAP1	Q15042	981 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	AMOTL1	Q8IY63	956 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	STRBP	Q96SI9	672 aa	Known RBP	12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	FSD1	Q9BTV5	496 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	LNPK	Q9C0E8	428 aa		12.8	□□□□□ -0.36
PTK2-256	ENST00000524257	CYP2D7	A0A087X1C5	515 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	USP17L12	C9JPN9	530 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	USP17L21	D6R901	530 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	CTGF	P29279	349 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	PSMC4	P43686	418 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	PDE1A	P54750	535 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	SOX10	P56693	466 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	IRX6	P78412	446 aa	Predicted RBP	12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	C12orf60	Q5U649	245 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	B4GALNT3	Q6L9W6	998 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	SMC5	Q8IY18	1101 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	SLC44A5	Q8NCS7	719 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	DYNLL2	Q96FJ2	89 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	STAP2	Q9UGK3	403 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	SWAP70	Q9UH65	585 aa		12.79	□□□□□ -0.36
PTK2-256	ENST00000524257	GSG1L2	A8MUP6	293 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	SMIM22	K7EJ46	135 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257		M0R2C6	588 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	MPHOSPH10	O00566	681 aa	Known RBP	12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	GPAA1	O43292	621 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	FMNL1	O95466	1100 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	GNRH1	P01148	92 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	OSBP	P22059	807 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	GUCY1A2	P33402	732 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	SEPT2	Q15019	361 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	ZYX	Q15942	572 aa	Known RBP	12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	CTR9	Q6PD62	1173 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	USP17L2	Q6R6M4	530 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	TRIM47	Q96LD4	638 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	FEZ1	Q99689	392 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	TAOK2	Q9UL54	1235 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	PTCH2	Q9Y6C5	1203 aa		12.78	□□□□□ -0.36
PTK2-256	ENST00000524257	CDK8	P49336	464 aa		12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	FCGRT	P55899	365 aa		12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	IRX3	P78415	501 aa	Predicted RBP	12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	C16orf86	Q6ZW13	317 aa		12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	ANKRD13C	Q8N6S4	541 aa		12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	SEC62	Q99442	399 aa	Known RBP	12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	EMILIN3	Q9NT22	766 aa		12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.77	□□□□□ -0.37
PTK2-256	ENST00000524257	DOCK3	Q8IZD9	2030 aa		12.76	□□□□□ -0.37
PTK2-256	ENST00000524257	AKR1B1	P15121	316 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms