RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ANGEL1Q9UNK9 670 aaKnown RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 HIRAP54198 1017 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 IFIT1BQ5T764 474 aaKnown RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 SYNE3Q6ZMZ3 975 aa10.98□□□□□ -0.65
SDCBP-212ENST00000523483 DHX36Q9H2U1 1008 aaKnown RBP10.98□□□□□ -0.65
SDCBP-212ENST00000523483 MAST2Q6P0Q8 1798 aa10.98□□□□□ -0.65
SDCBP-212ENST00000523483 GLTPD2A6NH11 291 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 EPHX2P34913 555 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 MCM2P49736 904 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 SNX21Q969T3 373 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 DDX11Q96FC9 970 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 ADARB2Q9NS39 739 aaKnown RBP10.97□□□□□ -0.65
SDCBP-212ENST00000523483 ANAPC4Q9UJX5 808 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 SLC12A7Q9Y666 1083 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
SDCBP-212ENST00000523483 SULF1Q8IWU6 871 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 PIBF1Q8WXW3 757 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 DCPSQ96C86 337 aaKnown RBP10.97□□□□□ -0.65
SDCBP-212ENST00000523483 ZSCAN10Q96SZ4 725 aaPredicted RBP10.97□□□□□ -0.65
SDCBP-212ENST00000523483 ZNF408Q9H9D4 720 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 CPLX1O14810 134 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 AKR1B1P15121 316 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 RASA1P20936 1047 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 EXOSC10Q01780 885 aaKnown RBP10.97□□□□□ -0.65
SDCBP-212ENST00000523483 CERKLQ49MI3 558 aaPredicted RBP10.97□□□□□ -0.65
SDCBP-212ENST00000523483 FAM151AQ8WW52 585 aa10.97□□□□□ -0.65
SDCBP-212ENST00000523483 ENTPD3O75355 529 aa10.96□□□□□ -0.65
SDCBP-212ENST00000523483 C16orf86Q6ZW13 317 aa10.96□□□□□ -0.65
SDCBP-212ENST00000523483 CMTR1Q8N1G2 835 aaKnown RBP10.96□□□□□ -0.65
SDCBP-212ENST00000523483 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.96□□□□□ -0.65
SDCBP-212ENST00000523483 NBPF12Q5TAG4 269 aaPredicted RBP10.96□□□□□ -0.65
SDCBP-212ENST00000523483 CCDC84Q86UT8 332 aaPredicted RBP10.96□□□□□ -0.65
SDCBP-212ENST00000523483 ENAHQ8N8S7 591 aaPredicted RBP10.96□□□□□ -0.65
SDCBP-212ENST00000523483 BRPF3Q9ULD4 1205 aa10.96□□□□□ -0.65
SDCBP-212ENST00000523483 ADM5C9JUS6 153 aa10.96□□□□□ -0.66
SDCBP-212ENST00000523483 TTLL12Q14166 644 aaPredicted RBP10.96□□□□□ -0.66
SDCBP-212ENST00000523483 KRT26Q7Z3Y9 468 aa10.96□□□□□ -0.66
SDCBP-212ENST00000523483 LRRC47Q8N1G4 583 aaKnown RBP10.96□□□□□ -0.66
SDCBP-212ENST00000523483 RRAGCQ9HB90 399 aa10.96□□□□□ -0.66
SDCBP-212ENST00000523483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.96□□□□□ -0.66
SDCBP-212ENST00000523483 SH2B2O14492 632 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-212ENST00000523483 POTEIP0CG38 1075 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 MTMR14Q8NCE2 650 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 CEP95Q96GE4 821 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 TMEM87BQ96K49 555 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 DNAJC18Q9H819 358 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 KAT14Q9H8E8 782 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 ZBTB43O43298 467 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 GH2P01242 217 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 METAP2P50579 478 aaKnown RBP eCLIP10.95□□□□□ -0.66
SDCBP-212ENST00000523483 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
SDCBP-212ENST00000523483 FOXD4L6Q3SYB3 417 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-212ENST00000523483 FOXD4L3Q6VB84 417 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-212ENST00000523483 SMC3Q9UQE7 1217 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 CNTNAP1P78357 1384 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 GOLGA8AA7E2F4 631 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 ORC4O43929 436 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 SHMT1P34896 483 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 IGDCC4Q8TDY8 1250 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 LY9Q9HBG7 655 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 CLIP2Q9UDT6 1046 aa10.95□□□□□ -0.66
SDCBP-212ENST00000523483 SBF1O95248 1867 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 IQCA1LA6NCM1 817 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-212ENST00000523483 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 FOXP4Q8IVH2 680 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-212ENST00000523483 CABP5Q9NP86 173 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 PDIA3P30101 505 aaKnown RBP10.94□□□□□ -0.66
SDCBP-212ENST00000523483 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
SDCBP-212ENST00000523483 SEPT2Q15019 361 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 ABCB5Q2M3G0 1257 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 APOA5Q6Q788 366 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 APOBEC3FQ8IUX4 373 aaKnown RBP10.94□□□□□ -0.66
SDCBP-212ENST00000523483 ZSCAN31Q96LW9 406 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-212ENST00000523483 SWAP70Q9UH65 585 aa10.94□□□□□ -0.66
SDCBP-212ENST00000523483 DHX16O60231 1041 aaKnown RBP10.93□□□□□ -0.66
SDCBP-212ENST00000523483 JAK2O60674 1132 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 PCP11498 1178 aaKnown RBP10.93□□□□□ -0.66
SDCBP-212ENST00000523483 SCRN1Q12765 414 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 USP48Q86UV5 1035 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 FAM83AQ86UY5 434 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 ZNF654Q8IZM8 581 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 ZBED3Q96IU2 234 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-212ENST00000523483 GLIS2Q9BZE0 524 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-212ENST00000523483 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 IL17RBQ9NRM6 502 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 GABPAQ06546 454 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 TAF1DQ9H5J8 278 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-212ENST00000523483 SH2B1Q9NRF2 756 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-212ENST00000523483 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 GOLGA8HP0CJ92 632 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 FAM184AQ8NB25 1140 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 MYH1P12882 1939 aa10.93□□□□□ -0.66
SDCBP-212ENST00000523483 hCG_1642624A0A1W2PR95 340 aa10.92□□□□□ -0.66
SDCBP-212ENST00000523483 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
SDCBP-212ENST00000523483 PHKBQ93100 1093 aa10.92□□□□□ -0.66
SDCBP-212ENST00000523483 ICA1Q05084 483 aa10.92□□□□□ -0.66
SDCBP-212ENST00000523483 SPICE1Q8N0Z3 855 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms