RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CST3P01034 146 aaPredicted RBP9.56□□□□□ -0.88
CPNE3-206ENST00000523469 TNNI2P48788 182 aa9.56□□□□□ -0.88
CPNE3-206ENST00000523469 CYP27A1Q02318 531 aa9.56□□□□□ -0.88
CPNE3-206ENST00000523469 CLCQ05315 142 aa9.56□□□□□ -0.88
CPNE3-206ENST00000523469 GNL2Q13823 731 aaKnown RBP9.56□□□□□ -0.88
CPNE3-206ENST00000523469 OGFOD3Q6PK18 319 aa9.56□□□□□ -0.88
CPNE3-206ENST00000523469 GK5Q6ZS86 529 aa9.56□□□□□ -0.88
CPNE3-206ENST00000523469 MFSD2AQ8NA29 543 aa9.56□□□□□ -0.88
CPNE3-206ENST00000523469 F13BP05160 661 aa9.55□□□□□ -0.88
CPNE3-206ENST00000523469 CPSF6Q16630 551 aaKnown RBP eCLIP9.55□□□□□ -0.88
CPNE3-206ENST00000523469 SHKBP1Q8TBC3 707 aa9.55□□□□□ -0.88
CPNE3-206ENST00000523469 METTL22Q9BUU2 404 aaPredicted RBP9.55□□□□□ -0.88
CPNE3-206ENST00000523469 CAPN10Q9HC96 672 aa9.55□□□□□ -0.88
CPNE3-206ENST00000523469 PRDM10Q9NQV6 1147 aa9.55□□□□□ -0.88
CPNE3-206ENST00000523469 ATG3Q9NT62 314 aa9.55□□□□□ -0.88
CPNE3-206ENST00000523469 WDR64B1ANS9 1081 aa9.54□□□□□ -0.88
CPNE3-206ENST00000523469 FAM87AP0C7U9 286 aa9.54□□□□□ -0.88
CPNE3-206ENST00000523469 YARSP54577 528 aaKnown RBP9.54□□□□□ -0.88
CPNE3-206ENST00000523469 PRAMEF13Q5VWM6 474 aa9.54□□□□□ -0.88
CPNE3-206ENST00000523469 ZDHHC13Q8IUH4 622 aa9.54□□□□□ -0.88
CPNE3-206ENST00000523469 DUSP23Q9BVJ7 150 aa9.54□□□□□ -0.88
CPNE3-206ENST00000523469 GINM1Q9NU53 330 aa9.54□□□□□ -0.88
CPNE3-206ENST00000523469 ADAM23O75077 832 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 IMPDH2P12268 514 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 SOX9P48436 509 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 CYP27C1Q4G0S4 372 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 SHISA5Q8N114 240 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 TOP6BLQ8N6T0 577 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 FAM13CQ8NE31 585 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 SEC16BQ96JE7 1060 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 OSBPL1AQ9BXW6 950 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 EFR3BQ9Y2G0 817 aa9.53□□□□□ -0.88
CPNE3-206ENST00000523469 FAM170BA6NMN3 283 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 ITGB7P26010 798 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 ZC3H6P61129 1189 aaKnown RBP9.52□□□□□ -0.89
CPNE3-206ENST00000523469 LRRFIP1Q32MZ4 808 aaKnown RBP9.52□□□□□ -0.89
CPNE3-206ENST00000523469 VPS37DQ86XT2 251 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 SLFN12Q8IYM2 578 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 FERD3LQ96RJ6 166 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 TINF2Q9BSI4 451 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 GMIPQ9P107 970 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 ZNRF3Q9ULT6 936 aa9.52□□□□□ -0.89
CPNE3-206ENST00000523469 SLC22A31A6NKX4 558 aa9.51□□□□□ -0.89
CPNE3-206ENST00000523469 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
CPNE3-206ENST00000523469 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
CPNE3-206ENST00000523469 ZNF765Q7L2R6 523 aa9.51□□□□□ -0.89
CPNE3-206ENST00000523469 DPH2Q9BQC3 489 aaPredicted RBP9.51□□□□□ -0.89
CPNE3-206ENST00000523469 KLHL3Q9UH77 587 aa9.51□□□□□ -0.89
CPNE3-206ENST00000523469 CHURC1-FNTBB4DL54 471 aa9.5□□□□□ -0.89
CPNE3-206ENST00000523469 DNAJA2O60884 412 aa9.5□□□□□ -0.89
CPNE3-206ENST00000523469 LEFTY1O75610 366 aa9.5□□□□□ -0.89
CPNE3-206ENST00000523469 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
CPNE3-206ENST00000523469 MIPEPQ99797 713 aa9.5□□□□□ -0.89
CPNE3-206ENST00000523469 PPT2Q9UMR5 302 aa9.5□□□□□ -0.89
CPNE3-206ENST00000523469 MEIS3P2A8K0S8 358 aa9.49□□□□□ -0.89
CPNE3-206ENST00000523469 SLITRK5O94991 958 aa9.49□□□□□ -0.89
CPNE3-206ENST00000523469 ATF4P18848 351 aaPredicted RBP9.49□□□□□ -0.89
CPNE3-206ENST00000523469 NASPP49321 788 aaPredicted RBP9.49□□□□□ -0.89
CPNE3-206ENST00000523469 LETMD1Q6P1Q0 360 aa9.49□□□□□ -0.89
CPNE3-206ENST00000523469 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
CPNE3-206ENST00000523469 CYB5D2Q8WUJ1 264 aa9.49□□□□□ -0.89
CPNE3-206ENST00000523469 LEMD3Q9Y2U8 911 aa9.49□□□□□ -0.89
CPNE3-206ENST00000523469 PRR19A6NJB7 356 aa9.48□□□□□ -0.89
CPNE3-206ENST00000523469 CDCP2Q5VXM1 449 aa9.48□□□□□ -0.89
CPNE3-206ENST00000523469 OVOS1Q6IE37 1185 aa9.48□□□□□ -0.89
CPNE3-206ENST00000523469 TMEM40Q8WWA1 233 aa9.48□□□□□ -0.89
CPNE3-206ENST00000523469 C8orf37Q96NL8 207 aa9.48□□□□□ -0.89
CPNE3-206ENST00000523469 PIM2Q9P1W9 311 aa9.48□□□□□ -0.89
CPNE3-206ENST00000523469 EOMESO95936 686 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 ARSHQ5FYA8 562 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 FBXW10Q5XX13 1052 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 ZNF746Q6NUN9 644 aaPredicted RBP9.47□□□□□ -0.89
CPNE3-206ENST00000523469 RBBP8NLQ8NC74 664 aaPredicted RBP9.47□□□□□ -0.89
CPNE3-206ENST00000523469 ATG4CQ96DT6 458 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 ANTXR1Q9H6X2 564 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 CNNM2Q9H8M5 875 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 GTF2IRD1Q9UHL9 959 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 STRIP2Q9ULQ0 834 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 RNF112Q9ULX5 631 aa9.47□□□□□ -0.89
CPNE3-206ENST00000523469 TGFB1P01137 390 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 RAG1P15918 1043 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 ARID5AQ03989 594 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 NAALADL2Q58DX5 795 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 FAM214BQ7L5A3 538 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 NLRC3Q7RTR2 1065 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 PHACTR4Q8IZ21 702 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 RIN3Q8TB24 985 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 CCDC74BQ96LY2 380 aa9.46□□□□□ -0.9
CPNE3-206ENST00000523469 SRRTQ9BXP5 876 aaKnown RBP9.46□□□□□ -0.9
CPNE3-206ENST00000523469 IGF2BP3O00425 579 aaKnown RBP eCLIP9.45□□□□□ -0.9
CPNE3-206ENST00000523469 FOSL1P15407 271 aa9.45□□□□□ -0.9
CPNE3-206ENST00000523469 ETV3P41162 512 aa9.45□□□□□ -0.9
CPNE3-206ENST00000523469 CCDC81Q6ZN84 652 aa9.45□□□□□ -0.9
CPNE3-206ENST00000523469 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
CPNE3-206ENST00000523469 PRDM5Q9NQX1 630 aaPredicted RBP9.45□□□□□ -0.9
CPNE3-206ENST00000523469 TPX2Q9ULW0 747 aaKnown RBP9.45□□□□□ -0.9
CPNE3-206ENST00000523469 CEP131Q9UPN4 1083 aa9.45□□□□□ -0.9
CPNE3-206ENST00000523469 CYP26A1O43174 497 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms