RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 NFXL1Q6ZNB6 911 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 HDXQ7Z353 690 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 VSIG10LQ86VR7 867 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 SLITRK4Q8IW52 837 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 FMNL2Q96PY5 1086 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 BRMS1Q9HCU9 246 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 C1GALT1Q9NS00 363 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 GINM1Q9NU53 330 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 BSDC1Q9NW68 430 aaPredicted RBP7.81□□□□□ -1.16
SKP1-211ENST00000523359 CRIM1Q9NZV1 1036 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 RNF114Q9Y508 228 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 SNCAIPQ9Y6H5 919 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 GFRA2O00451 464 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 PRNPP04156 253 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 ATF4P18848 351 aaPredicted RBP7.8□□□□□ -1.16
SKP1-211ENST00000523359 MCM4P33991 863 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 PPM1JQ5JR12 505 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 SEZ6L2Q6UXD5 910 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 VPS37DQ86XT2 251 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 TP53INP2Q8IXH6 220 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 ZC3H7BQ9UGR2 993 aaKnown RBP7.8□□□□□ -1.16
SKP1-211ENST00000523359 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
SKP1-211ENST00000523359 POLR3KQ9Y2Y1 108 aaPredicted RBP7.8□□□□□ -1.16
SKP1-211ENST00000523359 PRAMEF27A3QJZ7 478 aa7.79□□□□□ -1.16
SKP1-211ENST00000523359 GRIN3BO60391 1043 aa7.79□□□□□ -1.16
SKP1-211ENST00000523359 TXKP42681 527 aa7.79□□□□□ -1.16
SKP1-211ENST00000523359 CYP27A1Q02318 531 aa7.79□□□□□ -1.16
SKP1-211ENST00000523359 ARID5AQ03989 594 aa7.79□□□□□ -1.16
SKP1-211ENST00000523359 CYFIP1Q7L576 1253 aa7.79□□□□□ -1.16
SKP1-211ENST00000523359 SPATA32Q96LK8 384 aa7.79□□□□□ -1.16
SKP1-211ENST00000523359 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
SKP1-211ENST00000523359 ERVK-24P63145 666 aa7.78□□□□□ -1.16
SKP1-211ENST00000523359 RING1Q06587 406 aa7.78□□□□□ -1.16
SKP1-211ENST00000523359 FBXL18Q96ME1 805 aa7.78□□□□□ -1.16
SKP1-211ENST00000523359 PICK1Q9NRD5 415 aa7.78□□□□□ -1.16
SKP1-211ENST00000523359 DISC1Q9NRI5 854 aa7.78□□□□□ -1.16
SKP1-211ENST00000523359 CORINQ9Y5Q5 1042 aa7.78□□□□□ -1.16
SKP1-211ENST00000523359 TTBK1Q5TCY1 1321 aaPredicted RBP7.78□□□□□ -1.16
SKP1-211ENST00000523359 CLCQ05315 142 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 TTLL4Q14679 1199 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 GK5Q6ZS86 529 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 FLCNQ8NFG4 579 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 SEC16BQ96JE7 1060 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 GMLQ99445 158 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 ATXN3LQ9H3M9 355 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 PIDD1Q9HB75 910 aa7.77□□□□□ -1.17
SKP1-211ENST00000523359 HCLS1P14317 486 aaPredicted RBP7.76□□□□□ -1.17
SKP1-211ENST00000523359 SOX9P48436 509 aa7.76□□□□□ -1.17
SKP1-211ENST00000523359 ZNF165P49910 485 aa7.76□□□□□ -1.17
SKP1-211ENST00000523359 CDK5R2Q13319 367 aa7.76□□□□□ -1.17
SKP1-211ENST00000523359 COL9A2Q14055 689 aaPredicted RBP7.76□□□□□ -1.17
SKP1-211ENST00000523359 OGFOD3Q6PK18 319 aa7.76□□□□□ -1.17
SKP1-211ENST00000523359 RNF214Q8ND24 703 aa7.76□□□□□ -1.17
SKP1-211ENST00000523359 SREK1Q8WXA9 508 aaKnown RBP7.76□□□□□ -1.17
SKP1-211ENST00000523359 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.76□□□□□ -1.17
SKP1-211ENST00000523359 TANGO6Q9C0B7 1094 aa7.76□□□□□ -1.17
SKP1-211ENST00000523359 PCDHB14Q9Y5E9 798 aa7.76□□□□□ -1.17
SKP1-211ENST00000523359 NEFMP07197 916 aa7.75□□□□□ -1.17
SKP1-211ENST00000523359 FGRP09769 529 aa7.75□□□□□ -1.17
SKP1-211ENST00000523359 GRK4P32298 578 aa7.75□□□□□ -1.17
SKP1-211ENST00000523359 ETF1P62495 437 aaKnown RBP7.75□□□□□ -1.17
SKP1-211ENST00000523359 ZBTB37Q5TC79 503 aa7.75□□□□□ -1.17
SKP1-211ENST00000523359 CCDC81Q6ZN84 652 aa7.75□□□□□ -1.17
SKP1-211ENST00000523359 WNT10AQ9GZT5 417 aa7.75□□□□□ -1.17
SKP1-211ENST00000523359 PAK6Q9NQU5 681 aaPredicted RBP7.75□□□□□ -1.17
SKP1-211ENST00000523359 PPT2Q9UMR5 302 aa7.75□□□□□ -1.17
SKP1-211ENST00000523359 FANCGO15287 622 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 RNGTTO60942 597 aaKnown RBP7.74□□□□□ -1.17
SKP1-211ENST00000523359 PGRP06401 933 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 FAM87AP0C7U9 286 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 PLCG1P19174 1290 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 NTF4P34130 210 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 PDE4BQ07343 736 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 SF3A1Q15459 793 aaKnown RBP7.74□□□□□ -1.17
SKP1-211ENST00000523359 FBXW10Q5XX13 1052 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 MCF2L2Q86YR7 1114 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 REXO1Q8N1G1 1221 aaKnown RBP7.74□□□□□ -1.17
SKP1-211ENST00000523359 FERD3LQ96RJ6 166 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 PPP1R1BQ9UD71 204 aaPredicted RBP7.74□□□□□ -1.17
SKP1-211ENST00000523359 TACC3Q9Y6A5 838 aa7.74□□□□□ -1.17
SKP1-211ENST00000523359 HTR3BO95264 441 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 SSBP05455 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
SKP1-211ENST00000523359 CYP27C1Q4G0S4 372 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 CBLL1Q75N03 491 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 UBE3DQ7Z6J8 389 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 SMYD4Q8IYR2 804 aaPredicted RBP7.73□□□□□ -1.17
SKP1-211ENST00000523359 ISL2Q96A47 359 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 SRRTQ9BXP5 876 aaKnown RBP7.73□□□□□ -1.17
SKP1-211ENST00000523359 EHMT1Q9H9B1 1298 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 USP35Q9P2H5 1018 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 REV1Q9UBZ9 1251 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 PRR36Q9H6K5 1346 aa7.73□□□□□ -1.17
SKP1-211ENST00000523359 ATE1O95260 518 aa7.72□□□□□ -1.17
SKP1-211ENST00000523359 ATP2B1P20020 1258 aa7.72□□□□□ -1.17
SKP1-211ENST00000523359 ZNF574Q6ZN55 896 aaPredicted RBP7.72□□□□□ -1.17
SKP1-211ENST00000523359 FAM181AQ8N9Y4 354 aa7.72□□□□□ -1.17
SKP1-211ENST00000523359 AGBL5Q8NDL9 886 aa7.72□□□□□ -1.17
SKP1-211ENST00000523359 BCL7CQ8WUZ0 217 aaPredicted RBP7.72□□□□□ -1.17
SKP1-211ENST00000523359 CPLX3Q8WVH0 158 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms