RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ADGRA1Q86SQ6 560 aa27.95■■■□□ 2.06
PVT1-218ENST00000523328 TGFBRAP1Q8WUH2 860 aa27.95■■■□□ 2.06
PVT1-218ENST00000523328 TMOD4Q9NZQ9 345 aa27.95■■■□□ 2.06
PVT1-218ENST00000523328 TNNQ9UQP3 1299 aa27.95■■■□□ 2.06
PVT1-218ENST00000523328 FLT1P17948 1338 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 BAG3O95817 575 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 XRCC5P13010 732 aaKnown RBP27.94■■■□□ 2.06
PVT1-218ENST00000523328 PRKAR2AP13861 404 aaKnown RBP27.94■■■□□ 2.06
PVT1-218ENST00000523328 TRIM27P14373 513 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 PLCG2P16885 1265 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 MAPKAPK5Q8IW41 473 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 GPRC5AQ8NFJ5 357 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 NUDT12Q9BQG2 462 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 SNRKQ9NRH2 765 aa27.94■■■□□ 2.06
PVT1-218ENST00000523328 C19orf81C9J6K1 198 aa27.93■■■□□ 2.06
PVT1-218ENST00000523328 FOXP4Q8IVH2 680 aaPredicted RBP27.93■■■□□ 2.06
PVT1-218ENST00000523328 SOCS4Q8WXH5 440 aa27.93■■■□□ 2.06
PVT1-218ENST00000523328 RBPJLQ9UBG7 517 aa27.93■■■□□ 2.06
PVT1-218ENST00000523328 PFASO15067 1338 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 USP17L10C9JJH3 530 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 GDF11O95390 407 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 SYN1P17600 705 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 GPR153Q6NV75 609 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 USP6NLQ92738 828 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 GINM1Q9NU53 330 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 PALD1Q9ULE6 856 aa27.92■■■□□ 2.06
PVT1-218ENST00000523328 DLL1O00548 723 aa27.91■■■□□ 2.06
PVT1-218ENST00000523328 Q3C1V9 767 aa27.91■■■□□ 2.06
PVT1-218ENST00000523328 POTEEQ6S8J3 1075 aa27.91■■■□□ 2.06
PVT1-218ENST00000523328 GPR108Q9NPR9 543 aa27.91■■■□□ 2.06
PVT1-218ENST00000523328 ZBTB21Q9ULJ3 1066 aa27.91■■■□□ 2.06
PVT1-218ENST00000523328 CYP2E1P05181 493 aaPredicted RBP27.9■■■□□ 2.06
PVT1-218ENST00000523328 MAPK4P31152 587 aa27.9■■■□□ 2.06
PVT1-218ENST00000523328 MAGEA10P43363 369 aaPredicted RBP27.9■■■□□ 2.06
PVT1-218ENST00000523328 TNNI3KQ59H18 835 aa27.9■■■□□ 2.06
PVT1-218ENST00000523328 TTC39AQ5SRH9 613 aa27.9■■■□□ 2.06
PVT1-218ENST00000523328 CRACR2BQ8N4Y2 399 aaPredicted RBP27.9■■■□□ 2.06
PVT1-218ENST00000523328 DBNDD2Q9BQY9 259 aa27.9■■■□□ 2.06
PVT1-218ENST00000523328 PORCNQ9H237 461 aa27.9■■■□□ 2.06
PVT1-218ENST00000523328 FPGT-TNNI3KV9GXZ4 949 aa27.9■■■□□ 2.06
PVT1-218ENST00000523328 A0A0C4DFX4 3053 aa27.89■■■□□ 2.06
PVT1-218ENST00000523328 MYH1P12882 1939 aa27.89■■■□□ 2.06
PVT1-218ENST00000523328 ERVK-9P63128 1117 aa27.89■■■□□ 2.06
PVT1-218ENST00000523328 ERVK-24P63145 666 aa27.89■■■□□ 2.06
PVT1-218ENST00000523328 CACNB2Q08289 660 aaPredicted RBP27.89■■■□□ 2.06
PVT1-218ENST00000523328 LRIT3Q3SXY7 679 aa27.89■■■□□ 2.06
PVT1-218ENST00000523328 ATF7IPQ6VMQ6 1270 aa27.89■■■□□ 2.06
PVT1-218ENST00000523328 EMILIN3Q9NT22 766 aa27.89■■■□□ 2.06
PVT1-218ENST00000523328 FRMPD3Q5JV73 1810 aa27.88■■■□□ 2.05
PVT1-218ENST00000523328 IPO8O15397 1037 aaKnown RBP27.88■■■□□ 2.05
PVT1-218ENST00000523328 COL6A1P12109 1028 aa27.88■■■□□ 2.05
PVT1-218ENST00000523328 POLA2Q14181 598 aa27.88■■■□□ 2.05
PVT1-218ENST00000523328 PDE3AQ14432 1141 aa27.88■■■□□ 2.05
PVT1-218ENST00000523328 MORN1Q5T089 497 aa27.88■■■□□ 2.05
PVT1-218ENST00000523328 TRMT44Q8IYL2 757 aaKnown RBP27.88■■■□□ 2.05
PVT1-218ENST00000523328 ZKSCAN1P17029 563 aaPredicted RBP27.87■■■□□ 2.05
PVT1-218ENST00000523328 CCL14Q16627 93 aa27.87■■■□□ 2.05
PVT1-218ENST00000523328 CCDC158Q5M9N0 1113 aa27.87■■■□□ 2.05
PVT1-218ENST00000523328 GPR142Q7Z601 462 aa27.87■■■□□ 2.05
PVT1-218ENST00000523328 TDHQ8IZJ6 230 aa27.87■■■□□ 2.05
PVT1-218ENST00000523328 TRIM34Q9BYJ4 488 aa27.87■■■□□ 2.05
PVT1-218ENST00000523328 LHX8Q68G74 356 aa27.86■■■□□ 2.05
PVT1-218ENST00000523328 GTF3C2Q8WUA4 911 aaPredicted RBP27.86■■■□□ 2.05
PVT1-218ENST00000523328 CLUAP1Q96AJ1 413 aa27.86■■■□□ 2.05
PVT1-218ENST00000523328 ZNF512BQ96KM6 892 aaPredicted RBP27.86■■■□□ 2.05
PVT1-218ENST00000523328 PAGR1Q9BTK6 254 aa27.86■■■□□ 2.05
PVT1-218ENST00000523328 SAP30BPQ9UHR5 308 aaKnown RBP27.86■■■□□ 2.05
PVT1-218ENST00000523328 IGSF3O75054 1194 aa27.85■■■□□ 2.05
PVT1-218ENST00000523328 BCAR3O75815 825 aa27.85■■■□□ 2.05
PVT1-218ENST00000523328 CCND3P30281 292 aaPredicted RBP27.85■■■□□ 2.05
PVT1-218ENST00000523328 RGS2P41220 211 aa27.85■■■□□ 2.05
PVT1-218ENST00000523328 ZAP70P43403 619 aa27.85■■■□□ 2.05
PVT1-218ENST00000523328 DEFB123Q8N688 67 aa27.85■■■□□ 2.05
PVT1-218ENST00000523328 FRAT1Q92837 279 aaPredicted RBP27.85■■■□□ 2.05
PVT1-218ENST00000523328 PIH1D3Q9NQM4 214 aaKnown RBP27.85■■■□□ 2.05
PVT1-218ENST00000523328 HLA-DOAP06340 250 aa27.84■■■□□ 2.05
PVT1-218ENST00000523328 DYNLL1P63167 89 aaKnown RBP27.84■■■□□ 2.05
PVT1-218ENST00000523328 USP17L2Q6R6M4 530 aa27.84■■■□□ 2.05
PVT1-218ENST00000523328 Q7L0L9 218 aa27.84■■■□□ 2.05
PVT1-218ENST00000523328 PLEKHH3Q7Z736 793 aa27.84■■■□□ 2.05
PVT1-218ENST00000523328 APBA2Q99767 749 aa27.84■■■□□ 2.05
PVT1-218ENST00000523328 CCAR1Q8IX12 1150 aaKnown RBP27.83■■■□□ 2.05
PVT1-218ENST00000523328 SSH3Q8TE77 659 aa27.83■■■□□ 2.05
PVT1-218ENST00000523328 CNMDO75829 334 aa27.82■■■□□ 2.04
PVT1-218ENST00000523328 GH2P01242 217 aa27.82■■■□□ 2.04
PVT1-218ENST00000523328 C12orf42Q96LP6 360 aa27.82■■■□□ 2.04
PVT1-218ENST00000523328 UBE2OQ9C0C9 1292 aaKnown RBP27.82■■■□□ 2.04
PVT1-218ENST00000523328 CUL9Q8IWT3 2517 aa27.81■■■□□ 2.04
PVT1-218ENST00000523328 LRRC26Q2I0M4 334 aa27.81■■■□□ 2.04
PVT1-218ENST00000523328 TATDN1Q6P1N9 297 aa27.81■■■□□ 2.04
PVT1-218ENST00000523328 TMEM57Q8N5G2 664 aa27.81■■■□□ 2.04
PVT1-218ENST00000523328 DBNLQ9UJU6 430 aaKnown RBP27.81■■■□□ 2.04
PVT1-218ENST00000523328 RABGAP1Q9Y3P9 1069 aa27.81■■■□□ 2.04
PVT1-218ENST00000523328 CYP7A1P22680 504 aa27.8■■■□□ 2.04
PVT1-218ENST00000523328 ATP8B2P98198 1209 aa27.8■■■□□ 2.04
PVT1-218ENST00000523328 MAP2K5Q13163 448 aa27.8■■■□□ 2.04
PVT1-218ENST00000523328 OS9Q13438 667 aaPredicted RBP27.8■■■□□ 2.04
PVT1-218ENST00000523328 DNAH12Q6ZR08 3092 aa27.79■■■□□ 2.04
PVT1-218ENST00000523328 SURF6O75683 361 aaKnown RBP27.79■■■□□ 2.04
PVT1-218ENST00000523328 MTMR10Q9NXD2 777 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms