RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 RPTORQ8N122 1335 aa18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 IPO8O15397 1037 aaKnown RBP18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 CYP2B6P20813 491 aa18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 HERVK_113P62684 666 aa18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 MAP3K21Q5TCX8 1036 aa18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 C7orf61Q8IZ16 206 aa18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 TMEM57Q8N5G2 664 aa18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 HMX1Q9NP08 348 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 RBPJLQ9UBG7 517 aa18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 SAP30BPQ9UHR5 308 aaKnown RBP18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 ZMYND8Q9ULU4 1186 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-213ENST00000522504 A0A1W2PPC1 479 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 BAG3O95817 575 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 ASNSP08243 561 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 ZAP70P43403 619 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 IRX3P78415 501 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 Q3C1V9 767 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 TTC39AQ5SRH9 613 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 ANKLE1Q8NAG6 615 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 GDF15Q99988 308 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 NOL10Q9BSC4 688 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 GPR108Q9NPR9 543 aa18.75■□□□□ 0.59
TRAPPC9-213ENST00000522504 FOXP4Q8IVH2 680 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 GPRC5AQ8NFJ5 357 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 SSH3Q8TE77 659 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 NBPF3Q9H094 633 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 PORCNQ9H237 461 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 C1orf115Q9H7X2 142 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 EMILIN3Q9NT22 766 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 TLR7Q9NYK1 1049 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 TMOD4Q9NZQ9 345 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 OGDHLQ9ULD0 1010 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
TRAPPC9-213ENST00000522504 USP17L10C9JJH3 530 aa18.73■□□□□ 0.59
TRAPPC9-213ENST00000522504 PRKAR2AP13861 404 aaKnown RBP18.73■□□□□ 0.59
TRAPPC9-213ENST00000522504 PLCG2P16885 1265 aa18.73■□□□□ 0.59
TRAPPC9-213ENST00000522504 USP6NLQ92738 828 aa18.73■□□□□ 0.59
TRAPPC9-213ENST00000522504 DBNLQ9UJU6 430 aaKnown RBP18.73■□□□□ 0.59
TRAPPC9-213ENST00000522504 UNC80Q8N2C7 3258 aa18.73■□□□□ 0.59
TRAPPC9-213ENST00000522504 C19orf81C9J6K1 198 aa18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 SYN1P17600 705 aa18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 ATP8B2P98198 1209 aa18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 CCL14Q16627 93 aa18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 CCDC158Q5M9N0 1113 aa18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 ZNF512BQ96KM6 892 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 C11orf49Q9H6J7 331 aa18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 PFASO15067 1338 aa18.72■□□□□ 0.59
TRAPPC9-213ENST00000522504 MAST2Q6P0Q8 1798 aa18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 SURF6O75683 361 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 XRCC5P13010 732 aaKnown RBP18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 BMP8BP34820 402 aa18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 ERVK-24P63145 666 aa18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 CACNB2Q08289 660 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 OS9Q13438 667 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 NUDT12Q9BQG2 462 aa18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
TRAPPC9-213ENST00000522504 CCER2I3L3R5 266 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 GH2P01242 217 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 CYP7A1P22680 504 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 DDX60LQ5H9U9 1706 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 MORN1Q5T089 497 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 GPR142Q7Z601 462 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 MIGA1Q8NAN2 632 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 SOCS4Q8WXH5 440 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 CDK5RAP2Q96SN8 1893 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 PAGR1Q9BTK6 254 aa18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 CCDC8Q9H0W5 538 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 MYO5AQ9Y4I1 1855 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-213ENST00000522504 CNMDO75829 334 aa18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 CCND3P30281 292 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 MAPK4P31152 587 aa18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 MAGEA10P43363 369 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 LHX8Q68G74 356 aa18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 EAF2Q96CJ1 260 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 TRIM34Q9BYJ4 488 aa18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 GINM1Q9NU53 330 aa18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 NOP58Q9Y2X3 529 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-213ENST00000522504 FOCADQ5VW36 1801 aa18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 COL6A1P12109 1028 aa18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 RLBP1P12271 317 aa18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 ZKSCAN1P17029 563 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 ZYXQ15942 572 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 USP17L2Q6R6M4 530 aa18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 ANTXR1Q9H6X2 564 aa18.68■□□□□ 0.58
TRAPPC9-213ENST00000522504 IDH1O75874 414 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 HLA-DOAP06340 250 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 TATDN1Q6P1N9 297 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 PLEKHH3Q7Z736 793 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 MAGEB6Q8N7X4 407 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 SLC17A8Q8NDX2 589 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 ACER1Q8TDN7 264 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 EYSQ5T1H1 3165 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 CUL9Q8IWT3 2517 aa18.67■□□□□ 0.58
TRAPPC9-213ENST00000522504 RGS2P41220 211 aa18.66■□□□□ 0.58
TRAPPC9-213ENST00000522504 LRRC26Q2I0M4 334 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms