RNA–Protein interactions for RNA: ENST00000522327.1

UBR5-213, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-213ENST00000522327 COL2A1P02458 1487 aaPredicted RBP11.39□□□□□ -0.59
UBR5-213ENST00000522327 TRIM75PA6NK02 468 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 APAF1O14727 1248 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 PTPRAP18433 802 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 FAM110CQ1W6H9 321 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 FBXO33Q7Z6M2 555 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 PACS2Q86VP3 889 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 SUGT1Q9Y2Z0 365 aa11.39□□□□□ -0.59
UBR5-213ENST00000522327 NFIAQ12857 509 aa11.38□□□□□ -0.59
UBR5-213ENST00000522327 LRRC26Q2I0M4 334 aa11.38□□□□□ -0.59
UBR5-213ENST00000522327 TWISTNBQ3B726 338 aaPredicted RBP11.38□□□□□ -0.59
UBR5-213ENST00000522327 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
UBR5-213ENST00000522327 AFG3L2Q9Y4W6 797 aa11.38□□□□□ -0.59
UBR5-213ENST00000522327 A0A1B0GUL6 1792 aa11.38□□□□□ -0.59
UBR5-213ENST00000522327 MROH5Q6ZUA9 1318 aa11.37□□□□□ -0.59
UBR5-213ENST00000522327 FOSL2P15408 326 aa11.37□□□□□ -0.59
UBR5-213ENST00000522327 ZEB1P37275 1124 aaPredicted RBP11.37□□□□□ -0.59
UBR5-213ENST00000522327 CDC42EP5Q6NZY7 148 aa11.37□□□□□ -0.59
UBR5-213ENST00000522327 ZFRQ96KR1 1074 aaKnown RBP11.37□□□□□ -0.59
UBR5-213ENST00000522327 PUS3Q9BZE2 481 aaKnown RBP11.37□□□□□ -0.59
UBR5-213ENST00000522327 DAGLAQ9Y4D2 1042 aa11.37□□□□□ -0.59
UBR5-213ENST00000522327 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
UBR5-213ENST00000522327 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
UBR5-213ENST00000522327 EYSQ5T1H1 3165 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 DDX60LQ5H9U9 1706 aaKnown RBP11.36□□□□□ -0.59
UBR5-213ENST00000522327 COL6A1P12109 1028 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 METTL24Q5JXM2 366 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 TREML2Q5T2D2 321 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 MYLIPQ8WY64 445 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 TRIB2Q92519 343 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 FAM198AQ9UFP1 575 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
UBR5-213ENST00000522327 RAPGEFL1Q9UHV5 662 aa11.36□□□□□ -0.59
UBR5-213ENST00000522327 PHF20L1A8MW92 1017 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 TNFRSF10AO00220 468 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 GRM8O00222 908 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 CYP2B6P20813 491 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 PLA2G5P39877 138 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
UBR5-213ENST00000522327 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 KCNV2Q8TDN2 545 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 FAM122AQ96E09 287 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 CDCA7LQ96GN5 454 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 SEMA6BQ9H3T3 888 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 PRKAG2Q9UGJ0 569 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 GJD2Q9UKL4 321 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 ATRNL1Q5VV63 1379 aa11.35□□□□□ -0.59
UBR5-213ENST00000522327 TMEM265A0A087WTH1 108 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 F6X3S4 739 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
UBR5-213ENST00000522327 PRSS12P56730 875 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 PABPC4Q13310 644 aaKnown RBP eCLIP11.34□□□□□ -0.59
UBR5-213ENST00000522327 TJAP1Q5JTD0 557 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 BEND3Q5T5X7 828 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 MAP3K21Q5TCX8 1036 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 CCDC84Q86UT8 332 aaPredicted RBP11.34□□□□□ -0.59
UBR5-213ENST00000522327 ZSCAN29Q8IWY8 852 aaPredicted RBP11.34□□□□□ -0.59
UBR5-213ENST00000522327 ZFPM1Q8IX07 1006 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 WDR66Q8TBY9 1149 aa11.34□□□□□ -0.59
UBR5-213ENST00000522327 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
UBR5-213ENST00000522327 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.34□□□□□ -0.59
UBR5-213ENST00000522327 SOWAHBA6NEL2 793 aa11.33□□□□□ -0.6
UBR5-213ENST00000522327 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
UBR5-213ENST00000522327 IFIT1P09914 478 aaKnown RBP11.33□□□□□ -0.6
UBR5-213ENST00000522327 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
UBR5-213ENST00000522327 SOCS4Q8WXH5 440 aa11.33□□□□□ -0.6
UBR5-213ENST00000522327 PDE8BO95263 885 aa11.32□□□□□ -0.6
UBR5-213ENST00000522327 RGS3P49796 1198 aa11.32□□□□□ -0.6
UBR5-213ENST00000522327 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
UBR5-213ENST00000522327 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
UBR5-213ENST00000522327 TRMT44Q8IYL2 757 aaKnown RBP11.32□□□□□ -0.6
UBR5-213ENST00000522327 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
UBR5-213ENST00000522327 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
UBR5-213ENST00000522327 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
UBR5-213ENST00000522327 MGAMO43451 1857 aa11.32□□□□□ -0.6
UBR5-213ENST00000522327 ENTPD3O75355 529 aa11.31□□□□□ -0.6
UBR5-213ENST00000522327 LDHBP07195 334 aaKnown RBP11.31□□□□□ -0.6
UBR5-213ENST00000522327 PRDX5P30044 214 aa11.31□□□□□ -0.6
UBR5-213ENST00000522327 CCND3P30281 292 aaPredicted RBP11.31□□□□□ -0.6
UBR5-213ENST00000522327 CACNB2Q08289 660 aaPredicted RBP11.31□□□□□ -0.6
UBR5-213ENST00000522327 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
UBR5-213ENST00000522327 SHHQ15465 462 aa11.31□□□□□ -0.6
UBR5-213ENST00000522327 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
UBR5-213ENST00000522327 SUCLG2Q96I99 432 aa11.31□□□□□ -0.6
UBR5-213ENST00000522327 ASCC2Q9H1I8 757 aaPredicted RBP11.31□□□□□ -0.6
UBR5-213ENST00000522327 TTYH1Q9H313 450 aaPredicted RBP11.31□□□□□ -0.6
UBR5-213ENST00000522327 SLURP2P0DP57 97 aa11.3□□□□□ -0.6
UBR5-213ENST00000522327 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
UBR5-213ENST00000522327 HMGCS2P54868 508 aa11.3□□□□□ -0.6
UBR5-213ENST00000522327 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
UBR5-213ENST00000522327 SMAD3P84022 425 aaKnown RBP11.3□□□□□ -0.6
UBR5-213ENST00000522327 SPP2Q13103 211 aa11.3□□□□□ -0.6
UBR5-213ENST00000522327 C9orf50Q5SZB4 431 aa11.3□□□□□ -0.6
UBR5-213ENST00000522327 SH3BP5LQ7L8J4 393 aa11.3□□□□□ -0.6
UBR5-213ENST00000522327 CCAR1Q8IX12 1150 aaKnown RBP11.3□□□□□ -0.6
UBR5-213ENST00000522327 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
UBR5-213ENST00000522327 PRDM5Q9NQX1 630 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms