RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 PI4K2BQ8TCG2 481 aa21.57■■□□□ 1.04
TRAPPC9-211ENST00000521700 PARK7Q99497 189 aaKnown RBP21.57■■□□□ 1.04
TRAPPC9-211ENST00000521700 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
TRAPPC9-211ENST00000521700 ZBTB21Q9ULJ3 1066 aa21.57■■□□□ 1.04
TRAPPC9-211ENST00000521700 PTPN22Q9Y2R2 807 aa21.57■■□□□ 1.04
TRAPPC9-211ENST00000521700 NAV1Q8NEY1 1877 aa21.57■■□□□ 1.04
TRAPPC9-211ENST00000521700 LACTBP83111 547 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC9-211ENST00000521700 SH3D19Q5HYK7 790 aa21.56■■□□□ 1.04
TRAPPC9-211ENST00000521700 TREML2Q5T2D2 321 aa21.56■■□□□ 1.04
TRAPPC9-211ENST00000521700 PROCA1Q8NCQ7 364 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC9-211ENST00000521700 ATP8A2Q9NTI2 1148 aa21.56■■□□□ 1.04
TRAPPC9-211ENST00000521700 AGTPBP1Q9UPW5 1226 aa21.56■■□□□ 1.04
TRAPPC9-211ENST00000521700 SALL3Q9BXA9 1300 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 ERC2O15083 957 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 GLRX3O76003 335 aaKnown RBP21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 GH2P01242 217 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 CYP2D6P10635 497 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 MX1P20591 662 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 SHMT1P34896 483 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 HMGCS2P54868 508 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 GABPAQ06546 454 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 ARHGEF6Q15052 776 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 ARHGAP39Q9C0H5 1083 aa21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC9-211ENST00000521700 RNF113AO15541 343 aaKnown RBP21.54■■□□□ 1.04
TRAPPC9-211ENST00000521700 BCRP11274 1271 aa21.54■■□□□ 1.04
TRAPPC9-211ENST00000521700 RGS19P49795 217 aa21.54■■□□□ 1.04
TRAPPC9-211ENST00000521700 BACE1P56817 501 aa21.54■■□□□ 1.04
TRAPPC9-211ENST00000521700 CERKLQ49MI3 558 aaPredicted RBP21.54■■□□□ 1.04
TRAPPC9-211ENST00000521700 ZSWIM8A7E2V4 1837 aa21.53■■□□□ 1.04
TRAPPC9-211ENST00000521700 CTGFP29279 349 aa21.53■■□□□ 1.04
TRAPPC9-211ENST00000521700 MTMR2Q13614 643 aa21.53■■□□□ 1.04
TRAPPC9-211ENST00000521700 KIF22Q14807 665 aa21.53■■□□□ 1.04
TRAPPC9-211ENST00000521700 RWDD1Q9H446 243 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC9-211ENST00000521700 SLC4A4Q9Y6R1 1079 aa21.53■■□□□ 1.04
TRAPPC9-211ENST00000521700 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
TRAPPC9-211ENST00000521700 ECM2O94769 699 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC9-211ENST00000521700 IGHDP01880 384 aa21.52■■□□□ 1.04
TRAPPC9-211ENST00000521700 ABCB5Q2M3G0 1257 aa21.52■■□□□ 1.04
TRAPPC9-211ENST00000521700 APPBP2Q92624 585 aa21.52■■□□□ 1.04
TRAPPC9-211ENST00000521700 OSBP2Q969R2 916 aa21.52■■□□□ 1.04
TRAPPC9-211ENST00000521700 STRBPQ96SI9 672 aaKnown RBP21.52■■□□□ 1.04
TRAPPC9-211ENST00000521700 BAZ2AQ9UIF9 1905 aaKnown RBP21.52■■□□□ 1.04
TRAPPC9-211ENST00000521700 C19orf81C9J6K1 198 aa21.51■■□□□ 1.03
TRAPPC9-211ENST00000521700 USP17L10C9JJH3 530 aa21.51■■□□□ 1.03
TRAPPC9-211ENST00000521700 ZFYP08048 801 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC9-211ENST00000521700 SMC5Q8IY18 1101 aa21.51■■□□□ 1.03
TRAPPC9-211ENST00000521700 STAP2Q9UGK3 403 aa21.51■■□□□ 1.03
TRAPPC9-211ENST00000521700 CYP2D7A0A087X1C5 515 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 USP17L12C9JPN9 530 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 USP17L21D6R901 530 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 SMIM22K7EJ46 135 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 PSMC4P43686 418 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 SOX10P56693 466 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 RAB3GAP1Q15042 981 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 C12orf60Q5U649 245 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 SLC44A5Q8NCS7 719 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 SMCR8Q8TEV9 937 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 DYNLL2Q96FJ2 89 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 TRIM47Q96LD4 638 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 CABP5Q9NP86 173 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 TMOD4Q9NZQ9 345 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 PNMA3Q9UL41 463 aa21.5■■□□□ 1.03
TRAPPC9-211ENST00000521700 GNRH1P01148 92 aa21.49■■□□□ 1.03
TRAPPC9-211ENST00000521700 GUCY1A2P33402 732 aa21.49■■□□□ 1.03
TRAPPC9-211ENST00000521700 PDE1AP54750 535 aa21.49■■□□□ 1.03
TRAPPC9-211ENST00000521700 PABPC4Q13310 644 aaKnown RBP eCLIP21.49■■□□□ 1.03
TRAPPC9-211ENST00000521700 DDRGK1Q96HY6 314 aa21.49■■□□□ 1.03
TRAPPC9-211ENST00000521700 EMILIN3Q9NT22 766 aa21.49■■□□□ 1.03
TRAPPC9-211ENST00000521700 PTCH2Q9Y6C5 1203 aa21.49■■□□□ 1.03
TRAPPC9-211ENST00000521700 OSBPP22059 807 aa21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 LRRFIP1Q32MZ4 808 aaKnown RBP21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 B4GALNT3Q6L9W6 998 aa21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 CTR9Q6PD62 1173 aa21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 LNPKQ9C0E8 428 aa21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 ASCC2Q9H1I8 757 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 SWAP70Q9UH65 585 aa21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 TAOK2Q9UL54 1235 aa21.48■■□□□ 1.03
TRAPPC9-211ENST00000521700 GSG1L2A8MUP6 293 aa21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 M0R2C6 588 aa21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 GPAA1O43292 621 aa21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 FMNL1O95466 1100 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 HOXA7P31268 230 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 SEPT2Q15019 361 aa21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 USP17L2Q6R6M4 530 aa21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 ACER1Q8TDN7 264 aa21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 FSD1Q9BTV5 496 aa21.47■■□□□ 1.03
TRAPPC9-211ENST00000521700 MPHOSPH10O00566 681 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-211ENST00000521700 PRMT2P55345 433 aa21.46■■□□□ 1.03
TRAPPC9-211ENST00000521700 AMOTL1Q8IY63 956 aa21.46■■□□□ 1.03
TRAPPC9-211ENST00000521700 ANKRD13CQ8N6S4 541 aa21.46■■□□□ 1.03
TRAPPC9-211ENST00000521700 ARMC5Q96C12 935 aa21.46■■□□□ 1.03
TRAPPC9-211ENST00000521700 SEC62Q99442 399 aaKnown RBP21.46■■□□□ 1.03
TRAPPC9-211ENST00000521700 SRRDQ9UH36 339 aa21.46■■□□□ 1.03
TRAPPC9-211ENST00000521700 GCLCP48506 637 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 CDK8P49336 464 aa21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 FCGRTP55899 365 aa21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 ZYXQ15942 572 aaKnown RBP21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 GIMAP6Q6P9H5 292 aa21.45■■□□□ 1.02
TRAPPC9-211ENST00000521700 C16orf86Q6ZW13 317 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms