RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 C19orf81C9J6K1 198 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 HMGCRP04035 888 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 RLBP1P12271 317 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 IRX3P78415 501 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 HNRNPUQ00839 825 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 MTMR2Q13614 643 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 GTF3C2Q8WUA4 911 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 DPF3Q92784 378 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 CRISPLD2Q9H0B8 497 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 PIH1D3Q9NQM4 214 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 TLR7Q9NYK1 1049 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 TMOD4Q9NZQ9 345 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 NR2E3Q9Y5X4 410 aa10.87□□□□□ -0.67
CTNNA1-229ENST00000521683 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 CYP7A1P22680 504 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 CEP85Q6P2H3 762 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 DEFB118Q96PH6 123 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 PALD1Q9ULE6 856 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 ZBTB21Q9ULJ3 1066 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
CTNNA1-229ENST00000521683 IDH1O75874 414 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 GDF11O95390 407 aa10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 TFRCP02786 760 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 HERVK_113P62684 666 aa10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 DYNLL1P63167 89 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 JAG1P78504 1218 aa10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 CCDC8Q9H0W5 538 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 EHD4Q9H223 541 aa10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
CTNNA1-229ENST00000521683 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 DDX60LQ5H9U9 1706 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 PLXNB2O15031 1838 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 MYH1P12882 1939 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 MAP3K12Q12852 859 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 HSP90AB4PQ58FF6 505 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 TATDN1Q6P1N9 297 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 SOCS4Q8WXH5 440 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 C12orf42Q96LP6 360 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 SAP30BPQ9UHR5 308 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
CTNNA1-229ENST00000521683 A0A1W2PPC1 479 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 GH2P01242 217 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 MAPK4P31152 587 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 USP5P45974 858 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 NECAB2Q7Z6G3 386 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 TTC6Q86TZ1 520 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 AACSQ86V21 672 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 TRMT44Q8IYL2 757 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 MAGEB6Q8N7X4 407 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 MIGA1Q8NAN2 632 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 TXNRD2Q9NNW7 524 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 RBM27Q9P2N5 1060 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 EXOC6BQ9Y2D4 811 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 LAMA3Q16787 3333 aa10.83□□□□□ -0.68
CTNNA1-229ENST00000521683 EVI5O60447 810 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 MS4A1P11836 297 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 USP14P54578 494 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 ERVK-9P63128 1117 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 ERVK-24P63145 666 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 TTF1Q15361 905 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 MAP3K21Q5TCX8 1036 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 TRIB2Q92519 343 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 USP6NLQ92738 828 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 PAWRQ96IZ0 340 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 RIOK1Q9BRS2 568 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 ANTXR1Q9H6X2 564 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 RBPJLQ9UBG7 517 aa10.82□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L15C9J2P7 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L13C9JLJ4 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L11C9JVI0 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L18D6R9N7 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L22D6RA61 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L17D6RBQ6 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L19D6RCP7 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L20D6RJB6 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 USP17L24Q0WX57 530 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 TRIM32Q13049 653 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 LBX2Q6XYB7 198 aa10.81□□□□□ -0.68
CTNNA1-229ENST00000521683 MIER1Q8N108 512 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms