RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 MCTP1Q6DN14 999 aa25.97■■□□□ 1.75
PTP4A3-204ENST00000521578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.97■■□□□ 1.757e-7■■■□□ 14.6
PTP4A3-204ENST00000521578 LAMB1P07942 1786 aa25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 CPA1P15085 419 aa25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 CTDSPL2Q05D32 466 aa25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 TTLL12Q14166 644 aaPredicted RBP25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 KLHL40Q2TBA0 621 aa25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 EHD4Q9H223 541 aa25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 DNAJC18Q9H819 358 aa25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 SH2B1Q9NRF2 756 aaPredicted RBP25.96■■□□□ 1.75
PTP4A3-204ENST00000521578 ZNF213O14771 459 aa25.95■■□□□ 1.74
PTP4A3-204ENST00000521578 DCAF15Q66K64 600 aa25.95■■□□□ 1.74
PTP4A3-204ENST00000521578 SLC44A5Q8NCS7 719 aa25.95■■□□□ 1.74
PTP4A3-204ENST00000521578 LMBRD1Q9NUN5 540 aa25.95■■□□□ 1.74
PTP4A3-204ENST00000521578 ISY1Q9ULR0 285 aaKnown RBP25.95■■□□□ 1.74
PTP4A3-204ENST00000521578 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.95■■□□□ 1.74
PTP4A3-204ENST00000521578 TRPM7Q96QT4 1865 aa25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 PPP1R12BO60237 982 aaPredicted RBP25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 IMMTQ16891 758 aaKnown RBP25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 CST9Q5W186 159 aa25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 MOB2Q70IA6 237 aa25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 HERC5Q9UII4 1024 aaKnown RBP25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 GOLGA6L3A6NEY3 463 aa25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 TBC1D12O60347 775 aa25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 GABPAQ06546 454 aa25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 METTL16Q86W50 562 aaKnown RBP25.94■■□□□ 1.74
PTP4A3-204ENST00000521578 USP2O75604 605 aaPredicted RBP25.93■■□□□ 1.74
PTP4A3-204ENST00000521578 MAP3K10Q02779 954 aa25.93■■□□□ 1.74
PTP4A3-204ENST00000521578 KRT32Q14532 448 aa25.93■■□□□ 1.74
PTP4A3-204ENST00000521578 ZNF341Q9BYN7 854 aa25.93■■□□□ 1.74
PTP4A3-204ENST00000521578 INCENPQ9NQS7 918 aa25.93■■□□□ 1.74
PTP4A3-204ENST00000521578 ANGEL1Q9UNK9 670 aaKnown RBP25.93■■□□□ 1.74
PTP4A3-204ENST00000521578 CDK8P49336 464 aa25.92■■□□□ 1.74
PTP4A3-204ENST00000521578 C16orf86Q6ZW13 317 aa25.92■■□□□ 1.74
PTP4A3-204ENST00000521578 NBPF3Q9H094 633 aa25.92■■□□□ 1.74
PTP4A3-204ENST00000521578 GBA2Q9HCG7 927 aaPredicted RBP25.92■■□□□ 1.74
PTP4A3-204ENST00000521578 ANAPC4Q9UJX5 808 aa25.92■■□□□ 1.74
PTP4A3-204ENST00000521578 ROBO3Q96MS0 1386 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 SLC3A2P08195 630 aaKnown RBP25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 CYP21A2P08686 494 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 LAMA4Q16363 1823 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 WDR33Q9C0J8 1336 aaKnown RBP25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 PRDM1O75626 825 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 RPS6KB1P23443 525 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 SHMT1P34896 483 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 ANKRD1Q15327 319 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 BLOC1S2Q6QNY1 142 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 TBC1D10CQ8IV04 446 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 WRNIP1Q96S55 665 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 TACC3Q9Y6A5 838 aa25.91■■□□□ 1.74
PTP4A3-204ENST00000521578 ARMC9Q7Z3E5 817 aa25.9■■□□□ 1.74
PTP4A3-204ENST00000521578 C2orf69Q8N8R5 385 aa25.9■■□□□ 1.74
PTP4A3-204ENST00000521578 KLRG1Q96E93 195 aa25.9■■□□□ 1.74
PTP4A3-204ENST00000521578 MKNK2Q9HBH9 465 aa25.9■■□□□ 1.74
PTP4A3-204ENST00000521578 SWAP70Q9UH65 585 aa25.9■■□□□ 1.74
PTP4A3-204ENST00000521578 TAF6LQ9Y6J9 622 aa25.9■■□□□ 1.74
PTP4A3-204ENST00000521578 DDX49Q9Y6V7 483 aaKnown RBP25.9■■□□□ 1.74
PTP4A3-204ENST00000521578 PHF20L1A8MW92 1017 aa25.89■■□□□ 1.74
PTP4A3-204ENST00000521578 UBE2Q2LH0YL09 131 aa25.89■■□□□ 1.74
PTP4A3-204ENST00000521578 LARGE1O95461 756 aa25.89■■□□□ 1.74
PTP4A3-204ENST00000521578 IREB2P48200 963 aaKnown RBP25.89■■□□□ 1.74
PTP4A3-204ENST00000521578 RRP1BQ14684 758 aaKnown RBP25.89■■□□□ 1.74
PTP4A3-204ENST00000521578 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.89■■□□□ 1.74
PTP4A3-204ENST00000521578 PDE4BQ07343 736 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 TOMM22Q9NS69 142 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 MYH8P13535 1937 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 INPP5BP32019 993 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 AKNAD1Q5T1N1 836 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 TATDN1Q6P1N9 297 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 ZKSCAN4Q969J2 545 aaPredicted RBP25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 LARP6Q9BRS8 491 aaKnown RBP25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 ZNF112Q9UJU3 913 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 SMC3Q9UQE7 1217 aa25.88■■□□□ 1.73
PTP4A3-204ENST00000521578 PAPPA2Q9BXP8 1791 aa25.87■■□□□ 1.73
PTP4A3-204ENST00000521578 MFSD6Q6ZSS7 791 aa25.87■■□□□ 1.73
PTP4A3-204ENST00000521578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.87■■□□□ 1.736e-8■■□□□ 13.8
PTP4A3-204ENST00000521578 GDF11O95390 407 aa25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 FKBP1BP68106 108 aa25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 ME3Q16798 604 aa25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 CERKLQ49MI3 558 aaPredicted RBP25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 RRP12Q5JTH9 1297 aaKnown RBP25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 STAG1Q8WVM7 1258 aa25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 ZNF287Q9HBT7 754 aa25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 TPCN1Q9ULQ1 816 aa25.86■■□□□ 1.73
PTP4A3-204ENST00000521578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.86■■□□□ 1.732e-6■■■■□ 22.8
PTP4A3-204ENST00000521578 PRPF40AO75400 957 aaKnown RBP25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 RASA1P20936 1047 aa25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 MAP3K9P80192 1104 aa25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 MAP3K11Q16584 847 aa25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 SHROOM1Q2M3G4 852 aaPredicted RBP25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 RNF41Q9H4P4 317 aaPredicted RBP25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 TMEM88BA6NKF7 163 aa25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 TAOK2Q9UL54 1235 aa25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 NEDD4P46934 1319 aa25.85■■□□□ 1.73
PTP4A3-204ENST00000521578 OTOFQ9HC10 1997 aa25.84■■□□□ 1.73
PTP4A3-204ENST00000521578 CAP2P40123 477 aa25.84■■□□□ 1.73
PTP4A3-204ENST00000521578 MRE11P49959 708 aa25.84■■□□□ 1.73
PTP4A3-204ENST00000521578 JAG1P78504 1218 aa25.84■■□□□ 1.73
PTP4A3-204ENST00000521578 ST3GAL1Q11201 340 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms