RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DPY19L2Q6NUT2 758 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 CCDC83Q8IWF9 413 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.7■□□□□ 0.42
SREK1-209ENST00000520953 DHX36Q9H2U1 1008 aaKnown RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 PI4KBQ9UBF8 816 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 ANGEL1Q9UNK9 670 aaKnown RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 WDR19Q8NEZ3 1342 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 KLF18A0A0U1RQI7 1052 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 POTECB2RU33 542 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 PPFIA3O75145 1194 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 LMOD1P29536 600 aaPredicted RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 SEC23AQ15436 765 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 FKBP1CQ5VVH2 108 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 MIGA2Q7L4E1 593 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 TEPSINQ96N21 525 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 ZSCAN10Q96SZ4 725 aaPredicted RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 NCOA5Q9HCD5 579 aaKnown RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 MYH8P13535 1937 aa17.7■□□□□ 0.42
SREK1-209ENST00000520953 POLR2AP24928 1970 aaKnown RBP17.7■□□□□ 0.42
SREK1-209ENST00000520953 PCP11498 1178 aaKnown RBP17.69■□□□□ 0.42
SREK1-209ENST00000520953 MMP14P50281 582 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
SREK1-209ENST00000520953 JAG1P78504 1218 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 ZNF444Q8N0Y2 327 aaPredicted RBP17.69■□□□□ 0.42
SREK1-209ENST00000520953 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 EHD4Q9H223 541 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 CUL4AQ13619 759 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 ANKRD1Q15327 319 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 RCSD1Q6JBY9 416 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 FAM83AQ86UY5 434 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 FBXL16Q8N461 479 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
SREK1-209ENST00000520953 TMEM87BQ96K49 555 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 DEFB129Q9H1M3 183 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 ADARB2Q9NS39 739 aaKnown RBP17.69■□□□□ 0.42
SREK1-209ENST00000520953 HPS5Q9UPZ3 1129 aa17.69■□□□□ 0.42
SREK1-209ENST00000520953 TSPY3P0CV98 308 aa17.68■□□□□ 0.42
SREK1-209ENST00000520953 TSPY8P0CW00 308 aa17.68■□□□□ 0.42
SREK1-209ENST00000520953 PDIA3P30101 505 aaKnown RBP17.68■□□□□ 0.42
SREK1-209ENST00000520953 CCDC144CPQ8IYA2 1237 aa17.68■□□□□ 0.42
SREK1-209ENST00000520953 FZD1Q9UP38 647 aa17.68■□□□□ 0.42
SREK1-209ENST00000520953 COL2A1P02458 1487 aaPredicted RBP17.68■□□□□ 0.42
SREK1-209ENST00000520953 GDF11O95390 407 aa17.67■□□□□ 0.42
SREK1-209ENST00000520953 SCRN1Q12765 414 aa17.67■□□□□ 0.42
SREK1-209ENST00000520953 WTAPQ15007 396 aa17.67■□□□□ 0.42
SREK1-209ENST00000520953 GOLGA8BA8MQT2 603 aa17.67■□□□□ 0.42
SREK1-209ENST00000520953 NBPF12Q5TAG4 269 aaPredicted RBP17.67■□□□□ 0.42
SREK1-209ENST00000520953 METTL16Q86W50 562 aaKnown RBP17.67■□□□□ 0.42
SREK1-209ENST00000520953 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.67■□□□□ 0.42
SREK1-209ENST00000520953 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
SREK1-209ENST00000520953 EPHX2P34913 555 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 EVCP57679 992 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 NFXL1Q6ZNB6 911 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 RASGRP2Q7LDG7 609 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 MICU3Q86XE3 530 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 ZC3H4Q9UPT8 1303 aaKnown RBP17.66■□□□□ 0.42
SREK1-209ENST00000520953 APOA5Q6Q788 366 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 IQCA1Q86XH1 822 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 GTF3C6Q969F1 213 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 CEP95Q96GE4 821 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 CHMP5Q9NZZ3 219 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
SREK1-209ENST00000520953 MPHOSPH10O00566 681 aaKnown RBP17.65■□□□□ 0.42
SREK1-209ENST00000520953 PFKFB2O60825 505 aa17.65■□□□□ 0.42
SREK1-209ENST00000520953 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
SREK1-209ENST00000520953 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
SREK1-209ENST00000520953 DDIT3P35638 169 aa17.65■□□□□ 0.42
SREK1-209ENST00000520953 LIFRP42702 1097 aa17.65■□□□□ 0.42
SREK1-209ENST00000520953 TATDN1Q6P1N9 297 aa17.65■□□□□ 0.42
SREK1-209ENST00000520953 FOXP4Q8IVH2 680 aaPredicted RBP17.65■□□□□ 0.42
SREK1-209ENST00000520953 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
SREK1-209ENST00000520953 ZSCAN31Q96LW9 406 aaPredicted RBP17.65■□□□□ 0.42
SREK1-209ENST00000520953 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.65■□□□□ 0.42
SREK1-209ENST00000520953 ADM5C9JUS6 153 aa17.64■□□□□ 0.42
SREK1-209ENST00000520953 TNNI2P48788 182 aa17.64■□□□□ 0.42
SREK1-209ENST00000520953 SART3Q15020 963 aaKnown RBP17.64■□□□□ 0.42
SREK1-209ENST00000520953 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.42
SREK1-209ENST00000520953 TRIM34Q9BYJ4 488 aa17.64■□□□□ 0.42
SREK1-209ENST00000520953 ZNF287Q9HBT7 754 aa17.64■□□□□ 0.42
SREK1-209ENST00000520953 SH2B1Q9NRF2 756 aaPredicted RBP17.64■□□□□ 0.42
SREK1-209ENST00000520953 ERICH2A1L162 156 aa17.64■□□□□ 0.41
SREK1-209ENST00000520953 JAK2O60674 1132 aa17.64■□□□□ 0.41
SREK1-209ENST00000520953 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
SREK1-209ENST00000520953 TNFAIP1Q13829 316 aa17.64■□□□□ 0.41
SREK1-209ENST00000520953 CERKLQ49MI3 558 aaPredicted RBP17.64■□□□□ 0.41
SREK1-209ENST00000520953 ZNF274Q96GC6 653 aaPredicted RBP17.64■□□□□ 0.41
SREK1-209ENST00000520953 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
SREK1-209ENST00000520953 STX8Q9UNK0 236 aa17.64■□□□□ 0.41
SREK1-209ENST00000520953 GREB1LQ9C091 1923 aaPredicted RBP17.64■□□□□ 0.41
SREK1-209ENST00000520953 CCDC69A6NI79 296 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 CDC27P30260 824 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 GUCY1A2P33402 732 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 EAPPQ56P03 285 aaPredicted RBP17.63■□□□□ 0.41
SREK1-209ENST00000520953 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 MTMR7Q9Y216 660 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 IGKV6D-41A0A0C4DH26 115 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms