RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 RIOK1Q9BRS2 568 aaKnown RBP13.03□□□□□ -0.32
CLK4-206ENST00000520878 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
CLK4-206ENST00000520878 XIRP1Q702N8 1843 aaKnown RBP13.03□□□□□ -0.32
CLK4-206ENST00000520878 BTDP43251 543 aa13.02□□□□□ -0.32
CLK4-206ENST00000520878 EVCP57679 992 aa13.02□□□□□ -0.32
CLK4-206ENST00000520878 ZNF827Q17R98 1081 aa13.02□□□□□ -0.32
CLK4-206ENST00000520878 CPVLQ9H3G5 476 aa13.02□□□□□ -0.32
CLK4-206ENST00000520878 LRRC4BQ9NT99 713 aa13.02□□□□□ -0.32
CLK4-206ENST00000520878 TACC3Q9Y6A5 838 aa13.02□□□□□ -0.32
CLK4-206ENST00000520878 CCDC194A0A1B0GVG4 234 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 FAM205CA6NFA0 338 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 SMTNL1A8MU46 457 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 CAVIN2O95810 425 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 MMP1P03956 469 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 SCNN1DP51172 638 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 GPSM2P81274 684 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
CLK4-206ENST00000520878 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 SALL1Q9NSC2 1324 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
CLK4-206ENST00000520878 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
CLK4-206ENST00000520878 PLIN2Q99541 437 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 PYCARDQ9ULZ3 195 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 LEMD3Q9Y2U8 911 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 WDR19Q8NEZ3 1342 aa13.02□□□□□ -0.33
CLK4-206ENST00000520878 SEMA3EO15041 775 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 CALM1P0DP23 149 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 CALM2P0DP24 149 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 CALM3P0DP25 149 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
CLK4-206ENST00000520878 COL14A1Q05707 1796 aaKnown RBP13.01□□□□□ -0.33
CLK4-206ENST00000520878 A0A1W2PQ27 194 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 A0A1W2PQ64 194 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 A0A1W2PQD8 194 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 PNMA1Q8ND90 353 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 RASGRP4Q8TDF6 673 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 BRIP1Q9BX63 1249 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
CLK4-206ENST00000520878 CUTAO60888 179 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 STX17P56962 302 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 IKQ13123 557 aaPredicted RBP13.01□□□□□ -0.33
CLK4-206ENST00000520878 HSP90AA2PQ14568 343 aaPredicted RBP13.01□□□□□ -0.33
CLK4-206ENST00000520878 NTRK3Q16288 839 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
CLK4-206ENST00000520878 LONRF3Q496Y0 759 aa13□□□□□ -0.33
CLK4-206ENST00000520878 RBM28Q9NW13 759 aaKnown RBP13□□□□□ -0.33
CLK4-206ENST00000520878 CD209Q9NNX6 404 aa13□□□□□ -0.33
CLK4-206ENST00000520878 ARID5BQ14865 1188 aa13□□□□□ -0.33
CLK4-206ENST00000520878 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
CLK4-206ENST00000520878 KLHL34Q8N239 644 aa13□□□□□ -0.33
CLK4-206ENST00000520878 GRIK5Q16478 980 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 PCDHA5Q9Y5H7 936 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 N4BP2Q86UW6 1770 aaPredicted RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 FOXN1O15353 648 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 SKILP12757 684 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 CDC25AP30304 524 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 SHC4Q6S5L8 630 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 ZNF500O60304 480 aaPredicted RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 UBASH3AP57075 661 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 GRIN1Q05586 938 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 TCP10Q12799 353 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 TXNRD1Q16881 649 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 SLF2Q8IX21 1173 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 ENGASEQ8NFI3 743 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 TSC1Q92574 1164 aa12.99□□□□□ -0.33
CLK4-206ENST00000520878 RNF26Q9BY78 433 aaPredicted RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
CLK4-206ENST00000520878 SFPQP23246 707 aaKnown RBP eCLIP12.98□□□□□ -0.33
CLK4-206ENST00000520878 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 TXLNAP40222 546 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 EYA3Q99504 573 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 CSRNP2Q9H175 543 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.98□□□□□ -0.33
CLK4-206ENST00000520878 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
CLK4-206ENST00000520878 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 GYS1P13807 737 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 NLRP12P59046 1061 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 TTC38Q5R3I4 469 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 LAMB4A4D0S4 1761 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 SPATA31A6Q5VVP1 1343 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 NAPAP54920 295 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 XPO4Q9C0E2 1151 aaKnown RBP12.98□□□□□ -0.33
CLK4-206ENST00000520878 UBA5Q9GZZ9 404 aa12.98□□□□□ -0.33
CLK4-206ENST00000520878 TPM2P07951 284 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 CASP1P29466 404 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
CLK4-206ENST00000520878 USP49Q70CQ1 688 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms