RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MIR1-1HGQ9H1L0 117 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 PRDM10Q9NQV6 1147 aa6.79□□□□□ -1.32
SQLE-204ENST00000520493 LIG3P49916 1009 aa6.78□□□□□ -1.32
SQLE-204ENST00000520493 BNIP3Q12983 259 aa6.78□□□□□ -1.32
SQLE-204ENST00000520493 INPP5AQ14642 412 aa6.78□□□□□ -1.32
SQLE-204ENST00000520493 TAF1CQ15572 869 aaPredicted RBP6.78□□□□□ -1.32
SQLE-204ENST00000520493 MAP3K11Q16584 847 aa6.78□□□□□ -1.32
SQLE-204ENST00000520493 PLD6Q8N2A8 252 aaKnown RBP6.78□□□□□ -1.32
SQLE-204ENST00000520493 GAL3ST3Q96A11 431 aa6.78□□□□□ -1.32
SQLE-204ENST00000520493 NOC4LQ9BVI4 516 aaKnown RBP6.78□□□□□ -1.32
SQLE-204ENST00000520493 TMEM265A0A087WTH1 108 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 GNAT3A8MTJ3 354 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 SORBS3O60504 671 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 LRIG2O94898 1065 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 CEACAM5P06731 702 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 ITIH2P19823 946 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 NTF4P34130 210 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 MLANAQ16655 118 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 MEI1Q5TIA1 1274 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 CYFIP1Q7L576 1253 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 CRELD1Q96HD1 420 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 WNT10AQ9GZT5 417 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 RNF19AQ9NV58 838 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 VTI1BQ9UEU0 232 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 VAV3Q9UKW4 847 aa6.77□□□□□ -1.33
SQLE-204ENST00000520493 RNASE1P07998 156 aaKnown RBP6.76□□□□□ -1.33
SQLE-204ENST00000520493 PRKCQQ04759 706 aa6.76□□□□□ -1.33
SQLE-204ENST00000520493 PTPN11Q06124 597 aaPredicted RBP6.76□□□□□ -1.33
SQLE-204ENST00000520493 SEPT6Q14141 434 aa6.76□□□□□ -1.33
SQLE-204ENST00000520493 FBXO33Q7Z6M2 555 aa6.76□□□□□ -1.33
SQLE-204ENST00000520493 HID1Q8IV36 788 aa6.76□□□□□ -1.33
SQLE-204ENST00000520493 PRDM5Q9NQX1 630 aaPredicted RBP6.76□□□□□ -1.33
SQLE-204ENST00000520493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.76□□□□□ -1.33
SQLE-204ENST00000520493 TACC3Q9Y6A5 838 aa6.76□□□□□ -1.33
SQLE-204ENST00000520493 IGF2BP3O00425 579 aaKnown RBP eCLIP6.75□□□□□ -1.33
SQLE-204ENST00000520493 OXCT1P55809 520 aa6.75□□□□□ -1.33
SQLE-204ENST00000520493 TSNAXIP1Q2TAA8 658 aa6.75□□□□□ -1.33
SQLE-204ENST00000520493 ZNF746Q6NUN9 644 aaPredicted RBP6.75□□□□□ -1.33
SQLE-204ENST00000520493 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.75□□□□□ -1.33
SQLE-204ENST00000520493 ANKLE2Q86XL3 938 aa6.75□□□□□ -1.33
SQLE-204ENST00000520493 MFSD2AQ8NA29 543 aa6.75□□□□□ -1.33
SQLE-204ENST00000520493 FAM161BQ96MY7 647 aa6.75□□□□□ -1.33
SQLE-204ENST00000520493 FOXQ1Q9C009 403 aa6.75□□□□□ -1.33
SQLE-204ENST00000520493 MBNL3Q9NUK0 354 aaKnown RBP6.75□□□□□ -1.33
SQLE-204ENST00000520493 RAPGEFL1Q9UHV5 662 aa6.75□□□□□ -1.33
SQLE-204ENST00000520493 CTSWP56202 376 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 PDE4BQ07343 736 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 UBE3DQ7Z6J8 389 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 LRRN4CLQ8ND94 238 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 ADAMTS6Q9UKP5 1117 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 TPX2Q9ULW0 747 aaKnown RBP6.74□□□□□ -1.33
SQLE-204ENST00000520493 MAPK8IP1Q9UQF2 711 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 PCDHB5Q9Y5E4 795 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
SQLE-204ENST00000520493 USP31Q70CQ4 1352 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 RBM47A0AV96 593 aaKnown RBP6.73□□□□□ -1.33
SQLE-204ENST00000520493 E9PSI1 815 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 TSPAN15O95858 294 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 BPNT1O95861 308 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 INHBBP09529 407 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 FUT4P22083 530 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 GRK4P32298 578 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 CAP2P40123 477 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 PWP1Q13610 501 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 AOC3Q16853 763 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 ANGEL2Q5VTE6 544 aaKnown RBP6.73□□□□□ -1.33
SQLE-204ENST00000520493 ASB11Q8WXH4 323 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 MIPEPQ99797 713 aa6.73□□□□□ -1.33
SQLE-204ENST00000520493 CD8BP10966 210 aa6.72□□□□□ -1.33
SQLE-204ENST00000520493 TFE3P19532 575 aaPredicted RBP6.72□□□□□ -1.33
SQLE-204ENST00000520493 RPL6Q02878 288 aaKnown RBP6.72□□□□□ -1.33
SQLE-204ENST00000520493 ZNF326Q5BKZ1 582 aaKnown RBP6.72□□□□□ -1.33
SQLE-204ENST00000520493 PI4K2BQ8TCG2 481 aa6.72□□□□□ -1.33
SQLE-204ENST00000520493 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
SQLE-204ENST00000520493 HEXIM2Q96MH2 286 aaKnown RBP6.72□□□□□ -1.33
SQLE-204ENST00000520493 PPP1R16BQ96T49 567 aa6.72□□□□□ -1.33
SQLE-204ENST00000520493 FBRSQ9HAH7 460 aa6.72□□□□□ -1.33
SQLE-204ENST00000520493 EOMESO95936 686 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 PGRP06401 933 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 CTSHP09668 335 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 CYP7A1P22680 504 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 RBM25P49756 843 aaKnown RBP6.71□□□□□ -1.34
SQLE-204ENST00000520493 CLCN7P51798 805 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
SQLE-204ENST00000520493 CCDC84Q86UT8 332 aaPredicted RBP6.71□□□□□ -1.34
SQLE-204ENST00000520493 RELL1Q8IUW5 271 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 PHC3Q8NDX5 983 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 COX4I2Q96KJ9 171 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 BCL2L13Q9BXK5 485 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 TNKS2Q9H2K2 1166 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 TLR6Q9Y2C9 796 aa6.71□□□□□ -1.34
SQLE-204ENST00000520493 FAM155AB1AL88 458 aaPredicted RBP6.7□□□□□ -1.34
SQLE-204ENST00000520493 GFRA2O00451 464 aa6.7□□□□□ -1.34
SQLE-204ENST00000520493 SLITRK5O94991 958 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms