RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	FBXO27	Q8NI29	283 aa		10.51	□□□□□ -0.73
SDCBP-208	ENST00000520228	ACTL7B	Q9Y614	415 aa		10.51	□□□□□ -0.73
SDCBP-208	ENST00000520228	DCDC2C	A8MYV0	355 aa		10.5	□□□□□ -0.73
SDCBP-208	ENST00000520228	GJA8	P48165	433 aa		10.5	□□□□□ -0.73
SDCBP-208	ENST00000520228	PAK2	Q13177	524 aa		10.5	□□□□□ -0.73
SDCBP-208	ENST00000520228	CCSER2	Q9H7U1	834 aa		10.5	□□□□□ -0.73
SDCBP-208	ENST00000520228	HIF3A	Q9Y2N7	669 aa		10.5	□□□□□ -0.73
SDCBP-208	ENST00000520228	TTC37	Q6PGP7	1564 aa		10.5	□□□□□ -0.73
SDCBP-208	ENST00000520228	KIF14	Q15058	1648 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	NTF4	P34130	210 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	HDX	Q7Z353	690 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	C12orf40	Q86WS4	652 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	ATXN3L	Q9H3M9	355 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	FAM105A	Q9NUU6	356 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	UBP1	Q9NZI7	540 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	AP4E1	Q9UPM8	1137 aa		10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	DENND4B	O75064	1496 aa	Predicted RBP	10.49	□□□□□ -0.73
SDCBP-208	ENST00000520228	SART1	O43290	800 aa	Known RBP	10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	TNNI2	P48788	182 aa		10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	DYM	Q7RTS9	669 aa		10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	RASGRP4	Q8TDF6	673 aa		10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	MYRFL	Q96LU7	910 aa		10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	TACC3	Q9Y6A5	838 aa		10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	CCNB3	Q8WWL7	1395 aa		10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	SCAPER	Q9BY12	1400 aa		10.48	□□□□□ -0.73
SDCBP-208	ENST00000520228	PROC	P04070	461 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	REC114	Q7Z4M0	266 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	SLITRK4	Q8IW52	837 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	RNF214	Q8ND24	703 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	ELMO3	Q96BJ8	720 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	TINF2	Q9BSI4	451 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	CSAD	Q9Y600	493 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	ADGRL1	O94910	1474 aa		10.47	□□□□□ -0.73
SDCBP-208	ENST00000520228	BPNT1	O95861	308 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	NEFM	P07197	916 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	ASPA	P45381	313 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	TTLL4	Q14679	1199 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	PPM1J	Q5JR12	505 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	ZBTB37	Q5TC79	503 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	CDPF1	Q6NVV7	123 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	UTP4	Q969X6	686 aa	Known RBP	10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	ACSS3	Q9H6R3	686 aa		10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.46	□□□□□ -0.73
SDCBP-208	ENST00000520228	ARHGAP5	Q13017	1502 aa		10.46	□□□□□ -0.74
SDCBP-208	ENST00000520228	LRRIQ1	Q96JM4	1722 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	PRR36	Q9H6K5	1346 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	FANCG	O15287	622 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	TLR3	O15455	904 aa	Known RBP	10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	APOBR	Q0VD83	1088 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	SGO2	Q562F6	1265 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	DIEXF	Q68CQ4	756 aa	Known RBP	10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	AFAP1	Q8N556	730 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	EZH1	Q92800	747 aa	Predicted RBP	10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	GPRASP2	Q96D09	838 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	TPSG1	Q9NRR2	321 aa		10.45	□□□□□ -0.74
SDCBP-208	ENST00000520228	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	GAS2	O43903	313 aa	Known RBP	10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	ZC3H6	P61129	1189 aa	Known RBP	10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	CWF19L2	Q2TBE0	894 aa	Known RBP	10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	FAM20C	Q8IXL6	584 aa		10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	NKD1	Q969G9	470 aa		10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	C8orf37	Q96NL8	207 aa		10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	WNT10A	Q9GZT5	417 aa		10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	INPP5F	Q9Y2H2	1132 aa		10.44	□□□□□ -0.74
SDCBP-208	ENST00000520228	BMP3	P12645	472 aa		10.43	□□□□□ -0.74
SDCBP-208	ENST00000520228	SEZ6	Q53EL9	994 aa		10.43	□□□□□ -0.74
SDCBP-208	ENST00000520228	SPOCK3	Q9BQ16	436 aa		10.43	□□□□□ -0.74
SDCBP-208	ENST00000520228	BRMS1	Q9HCU9	246 aa		10.43	□□□□□ -0.74
SDCBP-208	ENST00000520228	CFAP74	Q9C0B2	1584 aa		10.43	□□□□□ -0.74
SDCBP-208	ENST00000520228	EHBP1L1	Q8N3D4	1523 aa		10.43	□□□□□ -0.74
SDCBP-208	ENST00000520228	POGZ	Q7Z3K3	1410 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	HCLS1	P14317	486 aa	Predicted RBP	10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	USP11	P51784	963 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	FBLIM1	Q8WUP2	373 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	ISL2	Q96A47	359 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	TP53INP1	Q96A56	240 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	SPATA32	Q96LK8	384 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	SEMA6C	Q9H3T2	930 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	CAPN10	Q9HC96	672 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	TIAM1	Q13009	1591 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	MAP3K1	Q13233	1512 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	LRRC9	Q6ZRR7	1453 aa		10.42	□□□□□ -0.74
SDCBP-208	ENST00000520228	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	PRAMEF27	A3QJZ7	478 aa		10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	DHX15	O43143	795 aa	Known RBP	10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	REXO1	Q8N1G1	1221 aa	Known RBP	10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	SLC43A3	Q8NBI5	491 aa		10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	PIDD1	Q9HB75	910 aa		10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	CORIN	Q9Y5Q5	1042 aa		10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	NCOA2	Q15596	1464 aa		10.41	□□□□□ -0.74
SDCBP-208	ENST00000520228	ZNF644	Q9H582	1327 aa	Predicted RBP	10.4	□□□□□ -0.74
SDCBP-208	ENST00000520228	ATE1	O95260	518 aa		10.4	□□□□□ -0.74
SDCBP-208	ENST00000520228	MAP4	P27816	1152 aa	Known RBP	10.4	□□□□□ -0.74
SDCBP-208	ENST00000520228	GRK4	P32298	578 aa		10.4	□□□□□ -0.74
SDCBP-208	ENST00000520228	SOX9	P48436	509 aa		10.4	□□□□□ -0.74
SDCBP-208	ENST00000520228	NAALADL2	Q58DX5	795 aa		10.4	□□□□□ -0.74

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