RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 FLT1P17948 1338 aa31.29■■■□□ 2.6
COL13A1-212ENST00000520133 CEBPZQ03701 1054 aaKnown RBP31.29■■■□□ 2.6
COL13A1-212ENST00000520133 NBPF11Q86T75 865 aa31.28■■■□□ 2.6
COL13A1-212ENST00000520133 DYNLL2Q96FJ2 89 aa31.28■■■□□ 2.6
COL13A1-212ENST00000520133 SAP30BPQ9UHR5 308 aaKnown RBP31.28■■■□□ 2.6
COL13A1-212ENST00000520133 TFAP4Q01664 338 aa31.28■■■□□ 2.6
COL13A1-212ENST00000520133 TROAPQ12815 778 aa31.28■■■□□ 2.6
COL13A1-212ENST00000520133 ZNF444Q8N0Y2 327 aaPredicted RBP31.28■■■□□ 2.6
COL13A1-212ENST00000520133 SLC16A10Q8TF71 515 aa31.28■■■□□ 2.6
COL13A1-212ENST00000520133 RNF26Q9BY78 433 aaPredicted RBP31.28■■■□□ 2.6
COL13A1-212ENST00000520133 F8W031 263 aaPredicted RBP31.27■■■□□ 2.6
COL13A1-212ENST00000520133 PLCD1P51178 756 aa31.27■■■□□ 2.6
COL13A1-212ENST00000520133 GNL2Q13823 731 aaKnown RBP31.27■■■□□ 2.6
COL13A1-212ENST00000520133 DBNDD1Q9H9R9 158 aa31.27■■■□□ 2.6
COL13A1-212ENST00000520133 AKAP17AQ02040 695 aaKnown RBP31.26■■■□□ 2.6
COL13A1-212ENST00000520133 MYSM1Q5VVJ2 828 aa31.26■■■□□ 2.6
COL13A1-212ENST00000520133 BICD2Q8TD16 824 aa31.26■■■□□ 2.6
COL13A1-212ENST00000520133 C7orf43Q8WVR3 580 aa31.26■■■□□ 2.6
COL13A1-212ENST00000520133 PGBD1Q96JS3 809 aa31.26■■■□□ 2.6
COL13A1-212ENST00000520133 RTEL1Q9NZ71 1219 aa31.26■■■□□ 2.6
COL13A1-212ENST00000520133 ZNF219Q9P2Y4 722 aaPredicted RBP31.26■■■□□ 2.6
COL13A1-212ENST00000520133 NMT2O60551 498 aa31.26■■■□□ 2.59
COL13A1-212ENST00000520133 DGKHQ86XP1 1220 aa31.26■■■□□ 2.59
COL13A1-212ENST00000520133 C10orf71Q711Q0 1435 aa31.25■■■□□ 2.59
COL13A1-212ENST00000520133 FKBP1AP62942 108 aaKnown RBP31.25■■■□□ 2.59
COL13A1-212ENST00000520133 HHIPL2Q6UWX4 724 aa31.25■■■□□ 2.59
COL13A1-212ENST00000520133 CCDC82Q8N4S0 544 aa31.25■■■□□ 2.59
COL13A1-212ENST00000520133 SUPT20HQ8NEM7 779 aa31.25■■■□□ 2.59
COL13A1-212ENST00000520133 CTCFLQ8NI51 663 aaPredicted RBP31.25■■■□□ 2.59
COL13A1-212ENST00000520133 KIF28PB7ZC32 967 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 TSPY3P0CV98 308 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 TSPY8P0CW00 308 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 STRIP1Q5VSL9 837 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 TSPY26PQ9H489 355 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 TCP11L1Q9NUJ3 509 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 POLR3EQ9NVU0 708 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 NASPP49321 788 aaPredicted RBP31.24■■■□□ 2.59
COL13A1-212ENST00000520133 SAFBQ15424 915 aaKnown RBP eCLIP31.24■■■□□ 2.59
COL13A1-212ENST00000520133 C16orf86Q6ZW13 317 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 TEKT1Q969V4 418 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 PANK2Q9BZ23 570 aa31.24■■■□□ 2.59
COL13A1-212ENST00000520133 FTOQ9C0B1 505 aaKnown RBP eCLIP31.24■■■□□ 2.59
COL13A1-212ENST00000520133 PDGFDQ9GZP0 370 aaPredicted RBP31.24■■■□□ 2.59
COL13A1-212ENST00000520133 LIG1P18858 919 aa31.23■■■□□ 2.59
COL13A1-212ENST00000520133 GRIPAP1Q4V328 841 aa31.23■■■□□ 2.59
COL13A1-212ENST00000520133 CMTR1Q8N1G2 835 aaKnown RBP31.23■■■□□ 2.59
COL13A1-212ENST00000520133 ANKS1AQ92625 1134 aa31.23■■■□□ 2.59
COL13A1-212ENST00000520133 KAT14Q9H8E8 782 aa31.23■■■□□ 2.59
COL13A1-212ENST00000520133 ECE2O60344 883 aa31.22■■■□□ 2.59
COL13A1-212ENST00000520133 MXD3Q9BW11 206 aa31.22■■■□□ 2.59
COL13A1-212ENST00000520133 DDX19AQ9NUU7 478 aaKnown RBP31.22■■■□□ 2.59
COL13A1-212ENST00000520133 YEATS4O95619 227 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 U2AF2P26368 475 aaKnown RBP eCLIP31.21■■■□□ 2.59
COL13A1-212ENST00000520133 GUCY1A2P33402 732 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 RCSD1Q6JBY9 416 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 RBSNQ9H1K0 784 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 TAOK2Q9UL54 1235 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 XBP1P17861 261 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 CDK8P49336 464 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 KCNG4Q8TDN1 519 aa31.21■■■□□ 2.59
COL13A1-212ENST00000520133 SCN9AQ15858 1988 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 UBE2Q2LH0YL09 131 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 PRPF3O43395 683 aaKnown RBP31.2■■■□□ 2.59
COL13A1-212ENST00000520133 MMP1P03956 469 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 RASA1P20936 1047 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 STK38Q15208 465 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 TMTC3Q6ZXV5 915 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 ANP32BQ92688 251 aaKnown RBP31.2■■■□□ 2.59
COL13A1-212ENST00000520133 MRIQ9BWK5 157 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 NUP62CLQ9H1M0 184 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 IL17RBQ9NRM6 502 aa31.2■■■□□ 2.59
COL13A1-212ENST00000520133 KIF5BP33176 963 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 ME1P48163 572 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 SCNN1DP51172 638 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 KIAA2012Q0VF49 1180 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 LINC00301Q8NCQ3 95 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 SLC44A5Q8NCS7 719 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 DACT1Q9NYF0 836 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 SNED1Q8TER0 1413 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 SF3A1Q15459 793 aaKnown RBP31.19■■■□□ 2.58
COL13A1-212ENST00000520133 TTLL6Q8N841 843 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 MAP3K14Q99558 947 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.19■■■□□ 2.58
COL13A1-212ENST00000520133 USP40Q9NVE5 1235 aa31.19■■■□□ 2.58
COL13A1-212ENST00000520133 USP17L3A6NCW0 530 aa31.18■■■□□ 2.58
COL13A1-212ENST00000520133 USP17L4A6NCW7 530 aa31.18■■■□□ 2.58
COL13A1-212ENST00000520133 FUT2Q10981 343 aa31.18■■■□□ 2.58
COL13A1-212ENST00000520133 USP17L1Q7RTZ2 530 aa31.18■■■□□ 2.58
COL13A1-212ENST00000520133 PLEKHA8P1O95397 391 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 PICALMQ13492 652 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 AOC3Q16853 763 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 ANO1Q5XXA6 986 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 CLIC4Q9Y696 253 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 CRKP46108 304 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 HDLBPQ00341 1268 aaKnown RBP31.17■■■□□ 2.58
COL13A1-212ENST00000520133 DACT2Q5SW24 774 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 PNMA1Q8ND90 353 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 KCNQ5Q9NR82 932 aa31.17■■■□□ 2.58
COL13A1-212ENST00000520133 MYH8P13535 1937 aa31.16■■■□□ 2.58
COL13A1-212ENST00000520133 C21orf2O43822 256 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms