RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 IFIT2P09913 472 aaKnown RBP6.03□□□□□ -1.44
SDC2-204ENST00000519914 NASPP49321 788 aaPredicted RBP6.03□□□□□ -1.44
SDC2-204ENST00000519914 CASP7P55210 303 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 GTF2IP78347 998 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 G3BP1Q13283 466 aaKnown RBP eCLIP6.03□□□□□ -1.44
SDC2-204ENST00000519914 GCKRQ14397 625 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 MTFR1Q15390 333 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 FAM182BQ5T319 152 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 USPL1Q5W0Q7 1092 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 LRRC69Q6ZNQ3 347 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 RUFY3Q7L099 469 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 DEPDC4Q8N2C3 294 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 SEMA6BQ9H3T3 888 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 BICC1Q9H694 974 aaKnown RBP6.03□□□□□ -1.44
SDC2-204ENST00000519914 NEUROD4Q9HD90 331 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 GPR108Q9NPR9 543 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 DIAPH3Q9NSV4 1193 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 ZDHHC3Q9NYG2 299 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 HMG20BQ9P0W2 317 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 ZNF232Q9UNY5 417 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 NOD1Q9Y239 953 aa6.03□□□□□ -1.44
SDC2-204ENST00000519914 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.03□□□□□ -1.44
SDC2-204ENST00000519914 NHSL1Q5SYE7 1610 aa6.02□□□□□ -1.44
SDC2-204ENST00000519914 PRAMEF22A3QJZ6 481 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 BACH1O14867 736 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 CYP27B1O15528 508 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 PRPF40AO75400 957 aaKnown RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 ZSCAN22P10073 491 aaPredicted RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 ATP5JP18859 108 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 AK2P54819 239 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 NEXNQ0ZGT2 675 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 CWF19L2Q2TBE0 894 aaKnown RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 ZNF468Q5VIY5 522 aaPredicted RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 CAVIN1Q6NZI2 390 aaKnown RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 KIAA1211Q6ZU35 1233 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 AACSQ86V21 672 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 Q8N3U1 123 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 FBXO41Q8TF61 875 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 ZDHHC1Q8WTX9 485 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 SYAP1Q96A49 352 aaPredicted RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 EAF2Q96CJ1 260 aaPredicted RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 TRIM11Q96F44 468 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 FMNL2Q96PY5 1086 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 ZNF358Q9NW07 568 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 LAMA4Q16363 1823 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 MYH15Q9Y2K3 1946 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 LRP6O75581 1613 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 DDX60Q8IY21 1712 aaKnown RBP6.02□□□□□ -1.45
SDC2-204ENST00000519914 TOGARAM1Q9Y4F4 1720 aa6.02□□□□□ -1.45
SDC2-204ENST00000519914 ERVV-2B6SEH9 535 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 LETM1O95202 739 aaPredicted RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 FAM157BP0CG42 384 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 ATF3P18847 181 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 ALAS2P22557 587 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 PSMA5P28066 241 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 MCM5P33992 734 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 SOX11P35716 441 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 PTH1RQ03431 593 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 PTPN12Q05209 780 aaKnown RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 ST3GAL1Q11201 340 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 OS9Q13438 667 aaPredicted RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 NCOA4Q13772 614 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 ANKRD1Q15327 319 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 UVSSAQ2YD98 709 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 CREB3L3Q68CJ9 461 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 CWC27Q6UX04 472 aaKnown RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 SYT9Q86SS6 491 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 ZSCAN30Q86W11 494 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 TNS4Q8IZW8 715 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 FAM184AQ8NB25 1140 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 PLBD2Q8NHP8 589 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 XAGE3Q8WTP9 111 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.01□□□□□ -1.45
SDC2-204ENST00000519914 ZNF496Q96IT1 587 aaPredicted RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 UPF3BQ9BZI7 483 aaKnown RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 RBSNQ9H1K0 784 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 ATG3Q9NT62 314 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 SCHIP1Q9P0W5 487 aaPredicted RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 PA2G4Q9UQ80 394 aaKnown RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 ATP6V1DQ9Y5K8 247 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 CYP46A1Q9Y6A2 500 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 PALLDQ8WX93 1383 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 STRCQ7RTU9 1775 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 PLCH1Q4KWH8 1693 aa6.01□□□□□ -1.45
SDC2-204ENST00000519914 COL5A2P05997 1499 aaPredicted RBP6.01□□□□□ -1.45
SDC2-204ENST00000519914 SLC27A2O14975 620 aa6□□□□□ -1.45
SDC2-204ENST00000519914 STX6O43752 255 aa6□□□□□ -1.45
SDC2-204ENST00000519914 F13A1P00488 732 aa6□□□□□ -1.45
SDC2-204ENST00000519914 ZKSCAN1P17029 563 aaPredicted RBP6□□□□□ -1.45
SDC2-204ENST00000519914 SYT1P21579 422 aa6□□□□□ -1.45
SDC2-204ENST00000519914 NOS2P35228 1153 aa6□□□□□ -1.45
SDC2-204ENST00000519914 GATA4P43694 442 aa6□□□□□ -1.45
SDC2-204ENST00000519914 TERF1P54274 439 aa6□□□□□ -1.45
SDC2-204ENST00000519914 ZC3H6P61129 1189 aaKnown RBP6□□□□□ -1.45
SDC2-204ENST00000519914 UBE2HP62256 183 aa6□□□□□ -1.45
SDC2-204ENST00000519914 XPCQ01831 940 aaPredicted RBP6□□□□□ -1.45
SDC2-204ENST00000519914 SFSWAPQ12872 951 aaKnown RBP6□□□□□ -1.45
SDC2-204ENST00000519914 NMIQ13287 307 aaPredicted RBP6□□□□□ -1.45
SDC2-204ENST00000519914 KRT32Q14532 448 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms