RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CAND2O75155 1236 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 RBM5P52756 815 aaKnown RBP eCLIP15.27■□□□□ 0.032e-12■■■■□ 23.8
PABPC1-208ENST00000519004 KCNB1Q14721 858 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 SLC39A14Q15043 492 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 PTGISQ16647 500 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 SPRED3Q2MJR0 410 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 BRAPQ7Z569 592 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 SH2D3CQ8N5H7 860 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 OR8K1Q8NGG5 319 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 EAF2Q96CJ1 260 aaPredicted RBP15.27■□□□□ 0.03
PABPC1-208ENST00000519004 RPGRIP1Q96KN7 1286 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 RNPC3Q96LT9 517 aaKnown RBP15.27■□□□□ 0.03
PABPC1-208ENST00000519004 BATF3Q9NR55 127 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 TLR7Q9NYK1 1049 aaKnown RBP15.27■□□□□ 0.03
PABPC1-208ENST00000519004 MAN1B1Q9UKM7 699 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.03
PABPC1-208ENST00000519004 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 OVOS2A0A0J9YW53 1432 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 OVOS2Q6IE36 1432 aa15.27■□□□□ 0.03
PABPC1-208ENST00000519004 RGPD1P0DJD0 1748 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 GOLGA6L7A0A1B0GV03 622 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 PSMD14O00487 310 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 FOXN1O15353 648 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 ATP1A1P05023 1023 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 PECAM1P16284 738 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 CASP14P31944 242 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 KDM7AQ6ZMT4 941 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 MYCBPAPQ8TBZ2 947 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 HOOK2Q96ED9 719 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 RSRC1Q96IZ7 334 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 CCT8L2Q96SF2 557 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 CCDC8Q9H0W5 538 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 IPO7O95373 1038 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 ATP5JP18859 108 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 EXOSC10Q01780 885 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 GUCY1A3Q02108 690 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 SYNE3Q6ZMZ3 975 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 NLRP14Q86W24 1093 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 TSEN2Q8NCE0 465 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 RASSF8Q8NHQ8 419 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 NUCKS1Q9H1E3 243 aaKnown RBP15.26■□□□□ 0.03
PABPC1-208ENST00000519004 SLC39A2Q9NP94 309 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 TRIM10Q9UDY6 481 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
PABPC1-208ENST00000519004 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
PABPC1-208ENST00000519004 RAB27AP51159 221 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 PAPD7Q5XG87 772 aaKnown RBP15.25■□□□□ 0.03
PABPC1-208ENST00000519004 CAPZA3Q96KX2 299 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 POLD4Q9HCU8 107 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 WWC3Q9ULE0 1092 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 SAR1BQ9Y6B6 198 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 ZMYM6O95789 1325 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 ANKRD18BA2A2Z9 1011 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 DNM1LO00429 736 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 OPLAHO14841 1288 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 GYPCP04921 128 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 MDM2Q00987 491 aaPredicted RBP15.25■□□□□ 0.03
PABPC1-208ENST00000519004 CKAP4Q07065 602 aaKnown RBP15.25■□□□□ 0.03
PABPC1-208ENST00000519004 SNX1Q13596 522 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 SLC5A9Q2M3M2 681 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 BEND3Q5T5X7 828 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 RESP18Q5W5W9 173 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 TMTC1Q8IUR5 882 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 SPDYE1Q8NFV5 336 aaPredicted RBP15.25■□□□□ 0.03
PABPC1-208ENST00000519004 CCDC51Q96ER9 411 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 C8orf76Q96K31 380 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 HOMER3Q9NSC5 361 aa15.25■□□□□ 0.03
PABPC1-208ENST00000519004 RIMS1Q86UR5 1692 aaKnown RBP15.24■□□□□ 0.03
PABPC1-208ENST00000519004 ENO4A6NNW6 628 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 PPP1R37O75864 691 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 HMGB1P09429 215 aaKnown RBP15.24■□□□□ 0.03
PABPC1-208ENST00000519004 SEC24CP53992 1094 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 KIAA1328Q86T90 577 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 CNGA4Q8IV77 575 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 EDC3Q96F86 508 aaKnown RBP15.24■□□□□ 0.03
PABPC1-208ENST00000519004 ANKARQ7Z5J8 1434 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 PDE2AO00408 941 aaPredicted RBP15.24■□□□□ 0.03
PABPC1-208ENST00000519004 MGRN1O60291 552 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 SASH1O94885 1247 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 IFFO1Q0D2I5 559 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 SLC9C2Q5TAH2 1124 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 EMC10Q5UCC4 262 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 ALS2CLQ60I27 953 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 CCDC102BQ68D86 513 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 CCDC121Q6ZUS5 278 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 ZNF274Q96GC6 653 aaPredicted RBP15.24■□□□□ 0.03
PABPC1-208ENST00000519004 SLF1Q9BQI6 1058 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 OSBPL7Q9BZF2 842 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 GJB4Q9NTQ9 266 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 REXO2Q9Y3B8 237 aaKnown RBP15.24■□□□□ 0.03
PABPC1-208ENST00000519004 RPS6KL1Q9Y6S9 549 aa15.24■□□□□ 0.03
PABPC1-208ENST00000519004 SIGLEC1Q9BZZ2 1709 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 FAM107AO95990 144 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 KIF23Q02241 960 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms