RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CABP5	Q9NP86	173 aa		29.11	■■■□□ 2.25
CNOT7-204	ENST00000518885	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	29.11	■■■□□ 2.25
CNOT7-204	ENST00000518885	CPA4	Q9UI42	421 aa		29.11	■■■□□ 2.25
CNOT7-204	ENST00000518885	GDF11	O95390	407 aa		29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	MX1	P20591	662 aa		29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	PRMT2	P55345	433 aa		29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	RRP1B	Q14684	758 aa	Known RBP	29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	CERKL	Q49MI3	558 aa	Predicted RBP	29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	SH3D19	Q5HYK7	790 aa		29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	CCDC84	Q86UT8	332 aa	Predicted RBP	29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	SDR42E1	Q8WUS8	393 aa		29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	DCP1A	Q9NPI6	582 aa	Predicted RBP	29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	NAV1	Q8NEY1	1877 aa		29.1	■■■□□ 2.25
CNOT7-204	ENST00000518885	OSBP	P22059	807 aa		29.09	■■■□□ 2.25
CNOT7-204	ENST00000518885	HOXD10	P28358	340 aa		29.09	■■■□□ 2.25
CNOT7-204	ENST00000518885	HMGCS2	P54868	508 aa		29.09	■■■□□ 2.25
CNOT7-204	ENST00000518885	BACE1	P56817	501 aa		29.09	■■■□□ 2.25
CNOT7-204	ENST00000518885	SWAP70	Q9UH65	585 aa		29.09	■■■□□ 2.25
CNOT7-204	ENST00000518885	USP17L10	C9JJH3	530 aa		29.08	■■■□□ 2.25
CNOT7-204	ENST00000518885	CYP2C8	P10632	490 aa		29.08	■■■□□ 2.25
CNOT7-204	ENST00000518885	ABCB5	Q2M3G0	1257 aa		29.08	■■■□□ 2.25
CNOT7-204	ENST00000518885	ADGRA2	Q96PE1	1338 aa		29.08	■■■□□ 2.25
CNOT7-204	ENST00000518885	GH2	P01242	217 aa		29.07	■■■□□ 2.24
CNOT7-204	ENST00000518885	MYH7	P12883	1935 aa		29.07	■■■□□ 2.24
CNOT7-204	ENST00000518885	PLCD1	P51178	756 aa		29.07	■■■□□ 2.24
CNOT7-204	ENST00000518885	MTMR2	Q13614	643 aa		29.07	■■■□□ 2.24
CNOT7-204	ENST00000518885	TSHZ3	Q63HK5	1081 aa		29.07	■■■□□ 2.24
CNOT7-204	ENST00000518885	SLC4A4	Q9Y6R1	1079 aa		29.07	■■■□□ 2.24
CNOT7-204	ENST00000518885	DDX60L	Q5H9U9	1706 aa	Known RBP	29.06	■■■□□ 2.24
CNOT7-204	ENST00000518885	RNF113A	O15541	343 aa	Known RBP	29.06	■■■□□ 2.24
CNOT7-204	ENST00000518885	NBPF11	Q86T75	865 aa		29.06	■■■□□ 2.24
CNOT7-204	ENST00000518885	APPBP2	Q92624	585 aa		29.06	■■■□□ 2.24
CNOT7-204	ENST00000518885	PTPRF	P10586	1907 aa		29.06	■■■□□ 2.24
CNOT7-204	ENST00000518885	FMNL1	O95466	1100 aa	Predicted RBP	29.05	■■■□□ 2.24
CNOT7-204	ENST00000518885	GCLC	P48506	637 aa	Predicted RBP	29.05	■■■□□ 2.24
CNOT7-204	ENST00000518885	RGS19	P49795	217 aa		29.05	■■■□□ 2.24
CNOT7-204	ENST00000518885	LOC285556	D6RIA3	1793 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	BCR	P11274	1271 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	GNAT2	P19087	354 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	PSMC4	P43686	418 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	USP14	P54578	494 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	FCGRT	P55899	365 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	RAB3GAP1	Q15042	981 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	TREML2	Q5T2D2	321 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	FEZ1	Q99689	392 aa		29.04	■■■□□ 2.24
CNOT7-204	ENST00000518885	SHMT1	P34896	483 aa		29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	IRX3	P78415	501 aa	Predicted RBP	29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	GABPA	Q06546	454 aa		29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	USP17L2	Q6R6M4	530 aa		29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	PI4K2B	Q8TCG2	481 aa		29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	FSD1	Q9BTV5	496 aa		29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	PUS7L	Q9H0K6	701 aa	Known RBP	29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	ARPP21	Q9UBL0	812 aa	Predicted RBP	29.03	■■■□□ 2.24
CNOT7-204	ENST00000518885	PRKAB2	O43741	272 aa		29.02	■■■□□ 2.24
CNOT7-204	ENST00000518885	SLC9C1	Q4G0N8	1177 aa		29.02	■■■□□ 2.24
CNOT7-204	ENST00000518885	GIMAP6	Q6P9H5	292 aa		29.02	■■■□□ 2.24
CNOT7-204	ENST00000518885	SUPT16H	Q9Y5B9	1047 aa	Known RBP	29.02	■■■□□ 2.24
CNOT7-204	ENST00000518885	MPHOSPH10	O00566	681 aa	Known RBP	29.01	■■■□□ 2.23
CNOT7-204	ENST00000518885	JAG1	P78504	1218 aa		29.01	■■■□□ 2.23
CNOT7-204	ENST00000518885	MLLT1	Q03111	559 aa	Predicted RBP	29.01	■■■□□ 2.23
CNOT7-204	ENST00000518885	SLFNL1	Q499Z3	407 aa		29.01	■■■□□ 2.23
CNOT7-204	ENST00000518885	HOXA7	P31268	230 aa	Predicted RBP	29	■■■□□ 2.23
CNOT7-204	ENST00000518885	SOX10	P56693	466 aa		29	■■■□□ 2.23
CNOT7-204	ENST00000518885	C12orf60	Q5U649	245 aa		29	■■■□□ 2.23
CNOT7-204	ENST00000518885	STRBP	Q96SI9	672 aa	Known RBP	29	■■■□□ 2.23
CNOT7-204	ENST00000518885	ARHGAP39	Q9C0H5	1083 aa		29	■■■□□ 2.23
CNOT7-204	ENST00000518885	USP17L12	C9JPN9	530 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	USP17L21	D6R901	530 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	FAM110C	Q1W6H9	321 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	EXOC6	Q8TAG9	804 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	OTUD7A	Q8TE49	926 aa	Predicted RBP	28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	GTF3C2	Q8WUA4	911 aa	Predicted RBP	28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	ARMC5	Q96C12	935 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	TRIM47	Q96LD4	638 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	CCDC17	Q96LX7	622 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	ASCC2	Q9H1I8	757 aa	Predicted RBP	28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	STAP2	Q9UGK3	403 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	SRRD	Q9UH36	339 aa		28.99	■■■□□ 2.23
CNOT7-204	ENST00000518885	TMEM179	Q6ZVK1	233 aa		28.98	■■■□□ 2.23
CNOT7-204	ENST00000518885	KIAA1683	Q9H0B3	1180 aa		28.98	■■■□□ 2.23
CNOT7-204	ENST00000518885	PTCH2	Q9Y6C5	1203 aa		28.98	■■■□□ 2.23
CNOT7-204	ENST00000518885	SALL3	Q9BXA9	1300 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	CYP2D6	P10635	497 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	SHROOM1	Q2M3G4	852 aa	Predicted RBP	28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	TICAM2	Q86XR7	235 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	SMC5	Q8IY18	1101 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	ANKRD13C	Q8N6S4	541 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	RAET1E	Q8TD07	263 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	OSBP2	Q969R2	916 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	NACAP1	Q9BZK3	213 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	SH2D4A	Q9H788	454 aa		28.97	■■■□□ 2.23
CNOT7-204	ENST00000518885	GPAA1	O43292	621 aa		28.96	■■■□□ 2.23
CNOT7-204	ENST00000518885	CHGB	P05060	677 aa		28.96	■■■□□ 2.23
CNOT7-204	ENST00000518885	EVI5L	Q96CN4	794 aa		28.96	■■■□□ 2.23
CNOT7-204	ENST00000518885	C12orf42	Q96LP6	360 aa		28.96	■■■□□ 2.23
CNOT7-204	ENST00000518885	ZNF287	Q9HBT7	754 aa		28.96	■■■□□ 2.23
CNOT7-204	ENST00000518885	MYPN	Q86TC9	1320 aa		28.95	■■■□□ 2.23
CNOT7-204	ENST00000518885	TNPO2	O14787	897 aa	Known RBP	28.95	■■■□□ 2.22
CNOT7-204	ENST00000518885	PDE1A	P54750	535 aa		28.95	■■■□□ 2.22
CNOT7-204	ENST00000518885	CAP1	Q01518	475 aa		28.95	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms