RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 ZNF654Q8IZM8 581 aa9.72□□□□□ -0.85
CTNNA1-210ENST00000518825 MPHOSPH8Q99549 860 aa9.72□□□□□ -0.85
CTNNA1-210ENST00000518825 A0A1B0GUL6 1792 aa9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 NPHP1O15259 732 aa9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 NPY5RQ15761 445 aa9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 CFAP100Q494V2 611 aa9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 APTXQ7Z2E3 356 aaKnown RBP9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 RIOK1Q9BRS2 568 aaKnown RBP9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 UTP14AQ9BVJ6 771 aaKnown RBP9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 CSRNP2Q9H175 543 aa9.71□□□□□ -0.85
CTNNA1-210ENST00000518825 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
CTNNA1-210ENST00000518825 EXOC5O00471 708 aa9.71□□□□□ -0.86
CTNNA1-210ENST00000518825 CABP5Q9NP86 173 aa9.71□□□□□ -0.86
CTNNA1-210ENST00000518825 ZHX1Q9UKY1 873 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-210ENST00000518825 SRPRBQ9Y5M8 271 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-210ENST00000518825 ZNF804BA4D1E1 1349 aa9.71□□□□□ -0.86
CTNNA1-210ENST00000518825 COL14A1Q05707 1796 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-210ENST00000518825 BAZ2AQ9UIF9 1905 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 MYH2Q9UKX2 1941 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 PRDM1O75626 825 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 DEXIO95424 95 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 CASP1P29466 404 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 GYG1P46976 350 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 PDILTQ8N807 584 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 ENAHQ8N8S7 591 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 TC2NQ8N9U0 490 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 TOMM22Q9NS69 142 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 SAMSN1Q9NSI8 373 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 LAMB2P55268 1798 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 H2AFXP16104 143 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 ETF1P62495 437 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 ZNF397Q8NF99 534 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 NUP133Q8WUM0 1156 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 EPSTI1Q96J88 318 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 TNKSO95271 1327 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 MYH6P13533 1939 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 PLEKHA8P1O95397 391 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 CD44P16070 742 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 TPM4P67936 248 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 RILPL1Q5EBL4 403 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 VPS54Q9P1Q0 977 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 ANAPC4Q9UJX5 808 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 NFE2L3Q9Y4A8 694 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 RTL9Q8NET4 1388 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 CASZ1Q86V15 1759 aa9.7□□□□□ -0.86
CTNNA1-210ENST00000518825 DUOX1Q9NRD9 1551 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 VEGFAP15692 232 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 GNAT2P19087 354 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 ATP2B1P20020 1258 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 CYP7A1P22680 504 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 TOGARAM2Q6ZUX3 1019 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 LRP2BPQ9P2M1 347 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 PARP3Q9Y6F1 533 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 MINDY4BA8MYZ0 360 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 KIF2AO00139 706 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 ADKP55263 362 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 WASF1Q92558 559 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 TNFRSF25Q93038 417 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 PHF20Q9BVI0 1012 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 ST7Q9NRC1 585 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 DNAI1Q9UI46 699 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■□□□ 12.7
CTNNA1-210ENST00000518825 TOP1P11387 765 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 ATP6V1AP38606 617 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 CCDC152Q4G0S7 254 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 OLFM4Q6UX06 510 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 ENOX1Q8TC92 643 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 WDR24Q96S15 920 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 NACAP1Q9BZK3 213 aa9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 NIP7Q9Y221 180 aaKnown RBP eCLIP9.69□□□□□ -0.86
CTNNA1-210ENST00000518825 PHLPP2Q6ZVD8 1323 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 A0A0U1RQJ8 604 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 KLRK1P26718 216 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 TROAPQ12815 778 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 NR1I3Q14994 352 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 SMIM5Q71RC9 77 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 SH3RF1Q7Z6J0 888 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 TRIM22Q8IYM9 498 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 ATRIPQ8WXE1 791 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 MTA3Q9BTC8 594 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 LOC102724428A0A0B4J2F2 783 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 TEX33O43247 280 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 CBFA2T2O43439 604 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 RCAN1P53805 252 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 SIK1P57059 783 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 DPYDQ12882 1025 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 MARCH10Q8NA82 808 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 GTPBP4Q9BZE4 634 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 ABCF2Q9UG63 623 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 PPP2R2CQ9Y2T4 447 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 DLEC1Q9Y238 1755 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 SCN7AQ01118 1682 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 NMT2O60551 498 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 FGRP09769 529 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 MTF1Q14872 753 aa9.68□□□□□ -0.86
CTNNA1-210ENST00000518825 ZSCAN10Q96SZ4 725 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms