RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ERVK-9P63128 1117 aa15.24■□□□□ 0.03
TRAPPC9-204ENST00000518723 ERVK-24P63145 666 aa15.24■□□□□ 0.03
TRAPPC9-204ENST00000518723 SLFN5Q08AF3 891 aa15.24■□□□□ 0.03
TRAPPC9-204ENST00000518723 MORN1Q5T089 497 aa15.24■□□□□ 0.03
TRAPPC9-204ENST00000518723 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAPPC9-204ENST00000518723 ATAD5Q96QE3 1844 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 PEX10O60683 326 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 ARID4AP29374 1257 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 CCND3P30281 292 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 MTX1Q13505 466 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 TBC1D9Q6ZT07 1266 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 PLEKHH3Q7Z736 793 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 GUCD1Q96NT3 240 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 MEIS3Q99687 375 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 APBA2Q99767 749 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 PORCNQ9H237 461 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 RAI14Q9P0K7 980 aa15.23■□□□□ 0.03
TRAPPC9-204ENST00000518723 USP17L10C9JJH3 530 aa15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 JAG1P78504 1218 aa15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 MDM2Q00987 491 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 CCL14Q16627 93 aa15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 Q3C1V9 767 aa15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 POTEEQ6S8J3 1075 aa15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 SH3RF3Q8TEJ3 882 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 NEUROD6Q96NK8 337 aa15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 API5Q9BZZ5 524 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 DNAJC18Q9H819 358 aa15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 SPTBN5Q9NRC6 3674 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-204ENST00000518723 SRGAP3O43295 1099 aa15.21■□□□□ 0.03
TRAPPC9-204ENST00000518723 PLCG2P16885 1265 aa15.21■□□□□ 0.03
TRAPPC9-204ENST00000518723 FOXP4Q8IVH2 680 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC9-204ENST00000518723 CCAR1Q8IX12 1150 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-204ENST00000518723 NOL10Q9BSC4 688 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-204ENST00000518723 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-204ENST00000518723 BAG3O95817 575 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 MCAMP43121 646 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 PPP4CP60510 307 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 MAP2K5Q13163 448 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 GORABQ5T7V8 394 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 LRP2BPQ9P2M1 347 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 RABGAP1Q9Y3P9 1069 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 EYSQ5T1H1 3165 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 SIPA1L1O43166 1804 aa15.2■□□□□ 0.02
TRAPPC9-204ENST00000518723 FLT1P17948 1338 aa15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 GNAI3P08754 354 aa15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 SHROOM1Q2M3G4 852 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L2Q6R6M4 530 aa15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 EDC3Q96F86 508 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 LBHD1Q9BQE6 289 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 AATFQ9NY61 560 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAPPC9-204ENST00000518723 MSCO60682 206 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 IGSF3O75054 1194 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 GLRX3O76003 335 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 GDF11O95390 407 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 HOXC6P09630 235 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 CCNA1P78396 465 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 MFSD14CQ5VZR4 134 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 MAPKAPK5Q8IW41 473 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 TGFBRAP1Q8WUH2 860 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 LPAR1Q92633 364 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 C12orf42Q96LP6 360 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 TRIM34Q9BYJ4 488 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 SENP6Q9GZR1 1112 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 DDX20Q9UHI6 824 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 TTC28Q96AY4 2481 aa15.18■□□□□ 0.02
TRAPPC9-204ENST00000518723 SLC15A5A6NIM6 579 aa15.17■□□□□ 0.02
TRAPPC9-204ENST00000518723 CNMDO75829 334 aa15.17■□□□□ 0.02
TRAPPC9-204ENST00000518723 CWC22Q9HCG8 908 aaKnown RBP15.17■□□□□ 0.02
TRAPPC9-204ENST00000518723 FLRT1Q9NZU1 646 aa15.17■□□□□ 0.02
TRAPPC9-204ENST00000518723 PALD1Q9ULE6 856 aa15.17■□□□□ 0.02
TRAPPC9-204ENST00000518723 MAST2Q6P0Q8 1798 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 PRUNE2Q8WUY3 3088 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L15C9J2P7 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L13C9JLJ4 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L11C9JVI0 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L18D6R9N7 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L22D6RA61 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L17D6RBQ6 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 DNM1LO00429 736 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 PTPREP23469 700 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 ZNF697Q5TEC3 545 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 CDCA7LQ96GN5 454 aa15.16■□□□□ 0.02
TRAPPC9-204ENST00000518723 CDH23Q9H251 3354 aa15.15■□□□□ 0.02
TRAPPC9-204ENST00000518723 GH2P01242 217 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms