RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 GINM1Q9NU53 330 aa14.15□□□□□ -0.14
TRAPPC9-203ENST00000517667 PA2G4Q9UQ80 394 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-203ENST00000517667 SPTBN5Q9NRC6 3674 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 DNAH12Q6ZR08 3092 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 LTBP2Q14767 1821 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 ERVK-24P63145 666 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 FAM9BQ8IZU0 186 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 SPATA5Q8NB90 893 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 GUCD1Q96NT3 240 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 CWC22Q9HCG8 908 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 TXNRD2Q9NNW7 524 aa14.14□□□□□ -0.15
TRAPPC9-203ENST00000517667 USP17L10C9JJH3 530 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 GLRX3O76003 335 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 PLCG2P16885 1265 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 CCND3P30281 292 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 MORN1Q5T089 497 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 ZNF697Q5TEC3 545 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 PLEKHH3Q7Z736 793 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 TRIM34Q9BYJ4 488 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 SMC4Q9NTJ3 1288 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 RAI14Q9P0K7 980 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 HMG20BQ9P0W2 317 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 PRKAG2Q9UGJ0 569 aa14.13□□□□□ -0.15
TRAPPC9-203ENST00000517667 MSCO60682 206 aa14.12□□□□□ -0.15
TRAPPC9-203ENST00000517667 BAG3O95817 575 aa14.12□□□□□ -0.15
TRAPPC9-203ENST00000517667 CCNA1P78396 465 aa14.12□□□□□ -0.15
TRAPPC9-203ENST00000517667 TFCP2Q12800 502 aa14.12□□□□□ -0.15
TRAPPC9-203ENST00000517667 GORABQ5T7V8 394 aa14.12□□□□□ -0.15
TRAPPC9-203ENST00000517667 NEUROD6Q96NK8 337 aa14.12□□□□□ -0.15
TRAPPC9-203ENST00000517667 RBPJLQ9UBG7 517 aa14.12□□□□□ -0.15
TRAPPC9-203ENST00000517667 EYSQ5T1H1 3165 aa14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 MAP2K5Q13163 448 aa14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 CCL14Q16627 93 aa14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 MFSD14CQ5VZR4 134 aa14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 METTL16Q86W50 562 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 FOXP4Q8IVH2 680 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 CRACR2BQ8N4Y2 399 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 PAGR1Q9BTK6 254 aa14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 PORCNQ9H237 461 aa14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
TRAPPC9-203ENST00000517667 SRGAP3O43295 1099 aa14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 PEX10O60683 326 aa14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 Q3C1V9 767 aa14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 ATF7IPQ6VMQ6 1270 aa14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 TBC1D9Q6ZT07 1266 aa14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 SH3RF3Q8TEJ3 882 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 EDC3Q96F86 508 aaKnown RBP14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 API5Q9BZZ5 524 aaKnown RBP14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 ZBTB21Q9ULJ3 1066 aa14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
TRAPPC9-203ENST00000517667 CDH23Q9H251 3354 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 DNM1LO00429 736 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 IGSF3O75054 1194 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 UQCRFS1P1P0C7P4 283 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 MTX1Q13505 466 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 USP17L2Q6R6M4 530 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 PI16Q6UXB8 463 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 LPAR1Q92633 364 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 FAM161BQ96MY7 647 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 DNAJC18Q9H819 358 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 AATFQ9NY61 560 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 RLFQ13129 1914 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 FLT1P17948 1338 aa14.09□□□□□ -0.15
TRAPPC9-203ENST00000517667 ZNF236Q9UL36 1845 aa14.08□□□□□ -0.15
TRAPPC9-203ENST00000517667 SLC15A5A6NIM6 579 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 GDF11O95390 407 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 HLA-DOAP06340 250 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 GNAI3P08754 354 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 CT47B1P0C2W7 299 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 MCAMP43121 646 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 NAA16Q6N069 864 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 TGFBRAP1Q8WUH2 860 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 MEIS3Q99687 375 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 IVNS1ABPQ9Y6Y0 642 aa14.08□□□□□ -0.16
TRAPPC9-203ENST00000517667 MYH1P12882 1939 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L15C9J2P7 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L13C9JLJ4 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L11C9JVI0 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L18D6R9N7 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L22D6RA61 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L17D6RBQ6 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L19D6RCP7 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L20D6RJB6 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 HOXC6P09630 235 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 CNGA1P29973 690 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP14P54578 494 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 PPP4CP60510 307 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 JAG1P78504 1218 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 SLFN5Q08AF3 891 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 USP17L24Q0WX57 530 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 MAPKAPK5Q8IW41 473 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 C12orf42Q96LP6 360 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 EMILIN3Q9NT22 766 aa14.07□□□□□ -0.16
TRAPPC9-203ENST00000517667 NOB1Q9ULX3 412 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms