RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 MFAP3LO75121 409 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 RASGRP2Q7LDG7 609 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 CSRNP2Q9H175 543 aa14.07□□□□□ -0.16
PCM1-203ENST00000517545 LRRIQ3A6PVS8 624 aaPredicted RBP14.06□□□□□ -0.16
PCM1-203ENST00000517545 MMP1P03956 469 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 ADD2P35612 726 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 PBX1P40424 430 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 PLEKHA4Q9H4M7 779 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 ADD3Q9UEY8 706 aaKnown RBP14.06□□□□□ -0.16
PCM1-203ENST00000517545 ERLIN1O75477 346 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
PCM1-203ENST00000517545 GYPCP04921 128 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 CDC25AP30304 524 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 OXER1Q8TDS5 423 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 TACC3Q9Y6A5 838 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 EIF3JO75822 258 aaKnown RBP14.06□□□□□ -0.16
PCM1-203ENST00000517545 CSB-PGBD3P0DP91 1061 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 SPATA20Q8TB22 786 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 PIH1D3Q9NQM4 214 aaKnown RBP14.06□□□□□ -0.16
PCM1-203ENST00000517545 SLC12A7Q9Y666 1083 aa14.06□□□□□ -0.16
PCM1-203ENST00000517545 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 RNF225M0QZC1 329 aaPredicted RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 ERCC5P28715 1186 aaPredicted RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 NOP2P46087 812 aaKnown RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 CTDSPL2Q05D32 466 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 TRIML1Q8N9V2 468 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 ZSWIM5Q9P217 1185 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 PLEKHG2Q9H7P9 1386 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 CCT6AP40227 531 aaKnown RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 ERVK-24P63145 666 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 SPATA1Q5VX52 437 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 EPSTI1Q96J88 318 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 TMEM87BQ96K49 555 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 ZKSCAN3Q9BRR0 538 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 NAA15Q9BXJ9 866 aaKnown RBP14.05□□□□□ -0.16
PCM1-203ENST00000517545 SYNRGQ9UMZ2 1314 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 ECM29Q5VYK3 1845 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 CTAGE15A4D2H0 777 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 CTAGE8P0CG41 777 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 CTAGE6Q86UF2 777 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 SGMS1Q86VZ5 419 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 CTAGE4Q8IX94 777 aa14.05□□□□□ -0.16
PCM1-203ENST00000517545 TJP1Q07157 1748 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 MAP3K15Q6ZN16 1313 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 ZNF532Q9HCE3 1301 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 FAM205CA6NFA0 338 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 IVLP07476 585 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 CUL4BQ13620 913 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 SAFBQ15424 915 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCM1-203ENST00000517545 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
PCM1-203ENST00000517545 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCM1-203ENST00000517545 ZNF330Q9Y3S2 320 aaPredicted RBP14.04□□□□□ -0.16
PCM1-203ENST00000517545 ARHGAP25P42331 645 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 DPYDQ12882 1025 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 LRRC31Q6UY01 552 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 CABP5Q9NP86 173 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
PCM1-203ENST00000517545 SRPRBQ9Y5M8 271 aaKnown RBP14.04□□□□□ -0.16
PCM1-203ENST00000517545 RILPL1Q5EBL4 403 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 SYNE4Q8N205 404 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 STAMQ92783 540 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 IFNAR1P17181 557 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 FAM204AQ9H8W3 233 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 TRIM10Q9UDY6 481 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 GLI3P10071 1580 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 SLF1Q9BQI6 1058 aa14.03□□□□□ -0.16
PCM1-203ENST00000517545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCM1-203ENST00000517545 METTL24Q5JXM2 366 aa14.02□□□□□ -0.16
PCM1-203ENST00000517545 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.16
PCM1-203ENST00000517545 FAM71BQ8TC56 605 aa14.02□□□□□ -0.16
PCM1-203ENST00000517545 EFCC1Q9HA90 598 aa14.02□□□□□ -0.16
PCM1-203ENST00000517545 EPB41L4AQ9HCS5 686 aaPredicted RBP14.02□□□□□ -0.16
PCM1-203ENST00000517545 TTF2Q9UNY4 1162 aaKnown RBP14.02□□□□□ -0.16
PCM1-203ENST00000517545 EIF3CLB5ME19 914 aaKnown RBP14.02□□□□□ -0.17
PCM1-203ENST00000517545 RPS6KA5O75582 802 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 SKIDA1Q1XH10 827 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 RRP12Q5JTH9 1297 aaKnown RBP14.02□□□□□ -0.17
PCM1-203ENST00000517545 PACS2Q86VP3 889 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 MSL3Q8N5Y2 521 aaKnown RBP14.02□□□□□ -0.17
PCM1-203ENST00000517545 PAGE5Q96GU1 130 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 EIF3CQ99613 913 aaKnown RBP14.02□□□□□ -0.17
PCM1-203ENST00000517545 FOXP1Q9H334 677 aaPredicted RBP14.02□□□□□ -0.17
PCM1-203ENST00000517545 STRN4Q9NRL3 753 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 PPP1R3GB7ZBB8 358 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 PDE6AP16499 860 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 AMPD2Q01433 879 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 WHAMMP3Q1A5X7 153 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 KANK3Q6NY19 840 aa14.02□□□□□ -0.17
PCM1-203ENST00000517545 CNGA4Q8IV77 575 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms