RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 IGFBP6P24592 240 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TKTP29401 623 aaKnown RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HOXC13P31276 330 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ASPAP45381 313 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ARL4DP49703 201 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HIRAP54198 1017 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 YBX1P67809 324 aaKnown RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HTRA3P83110 453 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DGCR2P98153 550 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ATP11AP98196 1134 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DLX2Q07687 328 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PRKD1Q15139 912 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SURF1Q15526 300 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PLEKHN1Q494U1 663 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LCE3CQ5T5A8 94 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ADGRF1Q5T601 910 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FAM214BQ7L5A3 538 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HDGFL2Q7Z4V5 671 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LDHDQ86WU2 507 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF761Q86XN6 746 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 OXR1Q8N573 874 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF483Q8TF39 744 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FNIP1Q8TF40 1166 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LRRN4Q8WUT4 740 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF592Q92610 1267 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MMRN2Q9H8L6 949 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 METTL14Q9HCE5 456 aaKnown RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SH2B1Q9NRF2 756 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PPP4R1LQ9P1A2 415 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SUSD2Q9UGT4 822 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNHIT2Q9UHR6 403 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FRMD4BQ9Y2L6 1034 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KLF2Q9Y5W3 355 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 COX11Q9Y6N1 276 aa0.13□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SERTM1A2A2V5 107 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TMEM191CA6NGB0 347 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DNAJC9-AS1A6NH13 148 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NUTM2BA6NNL0 878 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NUTM2EB1AL46 878 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ABLIM1O14639 778 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LAMTOR5O43504 91 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF623O75123 536 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RHOBTB3O94955 611 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PLA2G1BP04054 148 aaKnown RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KRT2P35908 639 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 LIMS1P48059 325 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF81P51508 661 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FOXF2Q12947 444 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TUBA3CQ13748 450 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 QPCTQ16769 361 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TUSC1Q2TAM9 212 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 USP39Q53GS9 565 aaKnown RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HP1BP3Q5SSJ5 553 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NUTM2DQ5VT03 806 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FNDC7Q5VTL7 733 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TUBA3EQ6PEY2 450 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 BORAQ6PGQ7 559 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 POTEAQ6S8J7 498 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NPNTQ6UXI9 565 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 THAP5Q7Z6K1 395 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NUTM2AQ8IVF1 878 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KRT78Q8N1N4 520 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 IGDCC4Q8TDY8 1250 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF526Q8TF50 670 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CACTINQ8WUQ7 758 aaKnown RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SLC7A3Q8WY07 619 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 EDAQ92838 391 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 DDX11Q96FC9 970 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HSPA12BQ96MM6 686 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TBC1D2Q9BYX2 928 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TXLNGQ9NUQ3 528 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MTMR4Q9NYA4 1195 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SCHIP1Q9P0W5 487 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SERTAD1Q9UHV2 236 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 GPR160Q9UJ42 338 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZNF232Q9UNY5 417 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 AP4E1Q9UPM8 1137 aa0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TP53BP1Q12888 1972 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TCF20Q9UGU0 1960 aaKnown RBP0.12□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FBN3Q75N90 2809 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZBBXA8MT70 800 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TMEM229AB2RXF0 380 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TGFBR3LH3BV60 316 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 PLSCR1O15162 318 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 RTL8CO15255 209 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 TBC1D4O60343 1298 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 EIF4EBP3O60516 100 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ZGLP1P0C6A0 271 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 NOVP48745 357 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 KIAA2012Q0VF49 1180 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 USP4Q13107 963 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MAP2K5Q13163 448 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 FHL1Q13642 323 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 VPS72Q15906 364 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 CSPP1Q1MSJ5 1256 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 MIDNQ504T8 468 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 HS1BP3Q53T59 392 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 ATXN7L2Q5T6C5 722 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 SH3PXD2AQ5TCZ1 1133 aa0.11□□□□□ -2.39
RNU6-1238P-201ENST00000517215 STRIP1Q5VSL9 837 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms