RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 RASGRF1Q13972 1273 aa11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 CCDC85BQ15834 202 aaPredicted RBP11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 MFSD14BQ5SR56 506 aa11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 WDR66Q8TBY9 1149 aa11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 BADQ92934 168 aa11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 EAF2Q96CJ1 260 aaPredicted RBP11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 DENND2AQ9ULE3 1009 aa11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 SLC45A1Q9Y2W3 748 aa11.45□□□□□ -0.58
CSNK1A1-206ENST00000515748 IGSF3O75054 1194 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 UQCRFS1P1P0C7P4 283 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 FAM83AQ86UY5 434 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 CLASRPQ8N2M8 674 aaKnown RBP11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 EXOC6Q8TAG9 804 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 TRIB2Q92519 343 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 GAS2L1Q99501 681 aaPredicted RBP11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 DBNDD2Q9BQY9 259 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 MRIQ9BWK5 157 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
CSNK1A1-206ENST00000515748 MAST3O60307 1309 aa11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 A0A0G2JLL6 359 aaPredicted RBP11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 FRAT2O75474 233 aaPredicted RBP11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 HDLBPQ00341 1268 aaKnown RBP11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 PRRT2Q7Z6L0 340 aaPredicted RBP11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 AACSQ86V21 672 aa11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 TLR7Q9NYK1 1049 aaKnown RBP11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 ZHX2Q9Y6X8 837 aa11.43□□□□□ -0.58
CSNK1A1-206ENST00000515748 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 DNAJB2P25686 324 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 RTP1P59025 263 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 CACNB2Q08289 660 aaPredicted RBP11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 CHAF1AQ13111 956 aaPredicted RBP11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 FAM110CQ1W6H9 321 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 CCDC158Q5M9N0 1113 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 NOL9Q5SY16 702 aaKnown RBP11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 GORABQ5T7V8 394 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 FKBP1CQ5VVH2 108 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 ZGPATQ8N5A5 531 aaKnown RBP11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 SPATA5Q8NB90 893 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 IL1RAPL2Q9NP60 686 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 C11orf16Q9NQ32 467 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 HMG20BQ9P0W2 317 aa11.42□□□□□ -0.58
CSNK1A1-206ENST00000515748 CYP2B6P20813 491 aa11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 CCND3P30281 292 aaPredicted RBP11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 MCAMP43121 646 aa11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 RNPC3Q96LT9 517 aaKnown RBP11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 RWDD1Q9H446 243 aaPredicted RBP11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 TMOD2Q9NZR1 351 aa11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 CXXC1Q9P0U4 656 aaPredicted RBP11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 ATP11BQ9Y2G3 1177 aa11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 TCF20Q9UGU0 1960 aaKnown RBP11.41□□□□□ -0.58
CSNK1A1-206ENST00000515748 FAM86C2PA6NEL3 165 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 SMIM22K7EJ46 135 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 CENPBP07199 599 aaPredicted RBP11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 IFIT2P09913 472 aaKnown RBP11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 GRIK5Q16478 980 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 TTC39AQ5SRH9 613 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 TMED8Q6PL24 325 aaPredicted RBP11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 HHIPL2Q6UWX4 724 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 SMC5Q8IY18 1101 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 TIFAQ96CG3 184 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 CCDC8Q9H0W5 538 aaPredicted RBP11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 TSPYL2Q9H2G4 693 aaPredicted RBP11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 PRDM5Q9NQX1 630 aaPredicted RBP11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 AFG3L2Q9Y4W6 797 aa11.4□□□□□ -0.58
CSNK1A1-206ENST00000515748 APBB1O00213 710 aa11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 LDHBP07195 334 aaKnown RBP11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 PRDX5P30044 214 aa11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 ADGRE1Q14246 886 aa11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 SPTY2D1Q68D10 685 aaPredicted RBP11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 PI16Q6UXB8 463 aa11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 TEKT1Q969V4 418 aa11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 ZDHHC15Q96MV8 337 aa11.39□□□□□ -0.59
CSNK1A1-206ENST00000515748 GAKO14976 1311 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 TRIM43BA6NCK2 446 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 PTPRAP18433 802 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 ATP5JP18859 108 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 IGFBP4P22692 258 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 KCNQ1P51787 676 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 EPHB4P54760 987 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 TFF2Q03403 129 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 AAK1Q2M2I8 961 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 APOBEC3HQ6NTF7 200 aaKnown RBP11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 SH3RF1Q7Z6J0 888 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 TRMT44Q8IYL2 757 aaKnown RBP11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 FAM151AQ8WW52 585 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 TRIM43Q96BQ3 446 aaPredicted RBP11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 MYO9BQ13459 2157 aa11.38□□□□□ -0.59
CSNK1A1-206ENST00000515748 SALL3Q9BXA9 1300 aa11.37□□□□□ -0.59
CSNK1A1-206ENST00000515748 CYP2E1P05181 493 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms