RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 CALM1P0DP23 149 aa17.93■□□□□ 0.46
THUMPD3-210ENST00000515662 CALM2P0DP24 149 aa17.93■□□□□ 0.46
THUMPD3-210ENST00000515662 CALM3P0DP25 149 aa17.93■□□□□ 0.46
THUMPD3-210ENST00000515662 PLCD1P51178 756 aa17.93■□□□□ 0.46
THUMPD3-210ENST00000515662 CCDC82Q8N4S0 544 aa17.93■□□□□ 0.46
THUMPD3-210ENST00000515662 BICD2Q8TD16 824 aa17.93■□□□□ 0.46
THUMPD3-210ENST00000515662 FBXO41Q8TF61 875 aa17.93■□□□□ 0.46
THUMPD3-210ENST00000515662 DDX60LQ5H9U9 1706 aaKnown RBP17.92■□□□□ 0.46
THUMPD3-210ENST00000515662 FLT1P17948 1338 aa17.92■□□□□ 0.46
THUMPD3-210ENST00000515662 SLX4Q8IY92 1834 aa17.92■□□□□ 0.46
THUMPD3-210ENST00000515662 DEXIO95424 95 aa17.92■□□□□ 0.46
THUMPD3-210ENST00000515662 TFAP4Q01664 338 aa17.92■□□□□ 0.46
THUMPD3-210ENST00000515662 G3V3G9 751 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 DCAF8Q5TAQ9 597 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 CNKSR1Q969H4 720 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 MKNK2Q9HBH9 465 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 POLR3EQ9NVU0 708 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 RBM28Q9NW13 759 aaKnown RBP17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 DACT1Q9NYF0 836 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 FUT2Q10981 343 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 RCSD1Q6JBY9 416 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 MXD3Q9BW11 206 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 RNF26Q9BY78 433 aaPredicted RBP17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 TAOK2Q9UL54 1235 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 CLIC4Q9Y696 253 aa17.91■□□□□ 0.46
THUMPD3-210ENST00000515662 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 U2AF2P26368 475 aaKnown RBP eCLIP17.9■□□□□ 0.462e-6■■□□□ 13.9
THUMPD3-210ENST00000515662 BAG6P46379 1132 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 LINC00301Q8NCQ3 95 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 PDGFDQ9GZP0 370 aaPredicted RBP17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 IL17RBQ9NRM6 502 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 DDX19AQ9NUU7 478 aaKnown RBP17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 TTF2Q9UNY4 1162 aaKnown RBP17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 YEATS4O95619 227 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 PODNQ7Z5L7 613 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 SLC44A5Q8NCS7 719 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 C7orf43Q8WVR3 580 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 NUP62CLQ9H1M0 184 aa17.9■□□□□ 0.46
THUMPD3-210ENST00000515662 NR1I2O75469 434 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 DEFB132Q7Z7B7 95 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 ANKS1AQ92625 1134 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 FUCA2Q9BTY2 467 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 PLEKHA8P1O95397 391 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 MMP1P03956 469 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 ME1P48163 572 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 GNL2Q13823 731 aaKnown RBP17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 TMTC3Q6ZXV5 915 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 DBNDD1Q9H9R9 158 aa17.89■□□□□ 0.45
THUMPD3-210ENST00000515662 FOCADQ5VW36 1801 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 RASA1P20936 1047 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 STK38Q15208 465 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 ANO1Q5XXA6 986 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 C16orf86Q6ZW13 317 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 CCAR1Q8IX12 1150 aaKnown RBP17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 ZNF444Q8N0Y2 327 aaPredicted RBP17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 KCNG4Q8TDN1 519 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 CLSTN2Q9H4D0 955 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 ZNF287Q9HBT7 754 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 TCP11L1Q9NUJ3 509 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 PCDHA7Q9UN72 937 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 PRPF3O43395 683 aaKnown RBP17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 TSPY3P0CV98 308 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 TSPY8P0CW00 308 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 CCDC178Q5BJE1 867 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 RNF214Q8ND24 703 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 KCNQ5Q9NR82 932 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 KCNJ14Q9UNX9 436 aa17.88■□□□□ 0.45
THUMPD3-210ENST00000515662 CDK8P49336 464 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 PKN1Q16512 942 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 CAMK4Q16566 473 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 SNED1Q8TER0 1413 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 SCNN1DP51172 638 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 SAFBQ15424 915 aaKnown RBP eCLIP17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 TNMDQ9H2S6 317 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 GOLPH3LQ9H4A5 285 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 KAT14Q9H8E8 782 aa17.87■□□□□ 0.45
THUMPD3-210ENST00000515662 C10orf71Q711Q0 1435 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 SPTLC2O15270 562 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 SF3A1Q15459 793 aaKnown RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 HHIPL2Q6UWX4 724 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 NOSTRINQ8IVI9 506 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 DIS3L2Q8IYB7 885 aaKnown RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 ANP32BQ92688 251 aaKnown RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 V9GY48 417 aaPredicted RBP17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 MYH1P12882 1939 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 A0A1W2PQ27 194 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 A0A1W2PQ64 194 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 A0A1W2PQD8 194 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 BTBD18B2RXH4 712 aa17.86■□□□□ 0.45
THUMPD3-210ENST00000515662 ECE2O60344 883 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms