RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 KIAA1211Q6ZU35 1233 aa14.17□□□□□ -0.14
SNF8-215ENST00000515572 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
SNF8-215ENST00000515572 CCDC17Q96LX7 622 aa14.17□□□□□ -0.14
SNF8-215ENST00000515572 IL25Q9H293 177 aa14.17□□□□□ -0.14
SNF8-215ENST00000515572 ANAPC4Q9UJX5 808 aa14.17□□□□□ -0.14
SNF8-215ENST00000515572 PTPRAP18433 802 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 CDK8P49336 464 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 EVX2Q03828 476 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 PDE4BQ07343 736 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 PPIL2Q13356 520 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 RRP1BQ14684 758 aaKnown RBP14.16□□□□□ -0.14
SNF8-215ENST00000515572 ABCB5Q2M3G0 1257 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 OTUD5Q96G74 571 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 CABP5Q9NP86 173 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
SNF8-215ENST00000515572 ZBTB21Q9ULJ3 1066 aa14.16□□□□□ -0.14
SNF8-215ENST00000515572 PTPRFP10586 1907 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 MANSC4A6NHS7 340 aaPredicted RBP14.15□□□□□ -0.14
SNF8-215ENST00000515572 USP17L5A8MUK1 530 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 ZNF213O14771 459 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 GDF11O95390 407 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 PCP11498 1178 aaKnown RBP14.15□□□□□ -0.14
SNF8-215ENST00000515572 SREBF2Q12772 1141 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 MKNK2Q9HBH9 465 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 ZHX2Q9Y6X8 837 aa14.15□□□□□ -0.14
SNF8-215ENST00000515572 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
SNF8-215ENST00000515572 GREB1LQ9C091 1923 aaPredicted RBP14.15□□□□□ -0.14
SNF8-215ENST00000515572 SMIM22K7EJ46 135 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 CXCL11O14625 94 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 AOC2O75106 756 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 GH2P01242 217 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 GJA5P36382 358 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 NT5C2P49902 561 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 GTF2A2P52657 109 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 INHBEP58166 350 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 IMMTQ16891 758 aaKnown RBP14.14□□□□□ -0.15
SNF8-215ENST00000515572 TMEM179Q6ZVK1 233 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 JMYQ8N9B5 988 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 WDR18Q9BV38 432 aa14.14□□□□□ -0.15
SNF8-215ENST00000515572 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
SNF8-215ENST00000515572 IRF6O14896 467 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 FGRP09769 529 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 KIF23Q02241 960 aaPredicted RBP14.13□□□□□ -0.15
SNF8-215ENST00000515572 MAP2K1Q02750 393 aaPredicted RBP14.13□□□□□ -0.15
SNF8-215ENST00000515572 PTH1RQ03431 593 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 CTDSPL2Q05D32 466 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 MKRN3Q13064 507 aaKnown RBP14.13□□□□□ -0.15
SNF8-215ENST00000515572 SNAPC2Q13487 334 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 ZNF444Q8N0Y2 327 aaPredicted RBP14.13□□□□□ -0.15
SNF8-215ENST00000515572 ZNF280CQ8ND82 737 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 MAP4K1Q92918 833 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 RNF41Q9H4P4 317 aaPredicted RBP14.13□□□□□ -0.15
SNF8-215ENST00000515572 ANO2Q9NQ90 1003 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 KCNH4Q9UQ05 1017 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 AFG3L2Q9Y4W6 797 aa14.13□□□□□ -0.15
SNF8-215ENST00000515572 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
SNF8-215ENST00000515572 ORC4O43929 436 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 CETPP11597 493 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 AKR1B1P15121 316 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 RASA1P20936 1047 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 TM4SF4P48230 202 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 JAG1P78504 1218 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 STK11IPQ8N1F8 1099 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 STAG1Q8WVM7 1258 aa14.12□□□□□ -0.15
SNF8-215ENST00000515572 LSG1Q9H089 658 aaKnown RBP14.12□□□□□ -0.15
SNF8-215ENST00000515572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNF8-215ENST00000515572 LOC285556D6RIA3 1793 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 REC8O95072 547 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 HAND2P61296 217 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 RAB3GAP1Q15042 981 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 SHROOM1Q2M3G4 852 aaPredicted RBP14.11□□□□□ -0.15
SNF8-215ENST00000515572 AKNAD1Q5T1N1 836 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 MFSD6Q6ZSS7 791 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 MS4A4AQ96JQ5 239 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
SNF8-215ENST00000515572 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.11□□□□□ -0.15
SNF8-215ENST00000515572 PLIN4Q96Q06 1357 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 CCL15-CCL14A0A0B4J2E2 113 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 A0A0G2JLL6 359 aaPredicted RBP14.1□□□□□ -0.15
SNF8-215ENST00000515572 TRIM75PA6NK02 468 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 C19orf81C9J6K1 198 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 USP17L10C9JJH3 530 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 EIF5BO60841 1220 aaKnown RBP14.1□□□□□ -0.15
SNF8-215ENST00000515572 PRDM1O75626 825 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 TSPY3P0CV98 308 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 TSPY8P0CW00 308 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 GUCY1A2P33402 732 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 SPP2Q13103 211 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 SEPT2Q15019 361 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 CCL15Q16663 113 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 OTUD7BQ6GQQ9 843 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 FASTKD5Q7L8L6 764 aaKnown RBP14.1□□□□□ -0.15
SNF8-215ENST00000515572 PRRT2Q7Z6L0 340 aaPredicted RBP14.1□□□□□ -0.15
SNF8-215ENST00000515572 CCDC84Q86UT8 332 aaPredicted RBP14.1□□□□□ -0.15
SNF8-215ENST00000515572 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
SNF8-215ENST00000515572 ZIC5Q96T25 663 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms