RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	NRAP	Q86VF7	1730 aa		8.84	□□□□□ -0.99
HIPK1-210	ENST00000514621	IP6K1	Q92551	441 aa		8.84	□□□□□ -0.99
HIPK1-210	ENST00000514621	CITED4	Q96RK1	184 aa		8.84	□□□□□ -0.99
HIPK1-210	ENST00000514621	FOXD3	Q9UJU5	478 aa	Predicted RBP	8.84	□□□□□ -0.99
HIPK1-210	ENST00000514621	GNE	Q9Y223	722 aa	Known RBP	8.84	□□□□□ -0.99
HIPK1-210	ENST00000514621	CCDC9	Q9Y3X0	531 aa	Known RBP	8.84	□□□□□ -0.99
HIPK1-210	ENST00000514621	COL5A2	P05997	1499 aa	Predicted RBP	8.83	□□□□□ -1
HIPK1-210	ENST00000514621	SPATA31A5	Q5VU36	1347 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	SPATA31A7	Q8IWB4	1347 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	8.83	□□□□□ -1
HIPK1-210	ENST00000514621	DYRK3	O43781	588 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	NEFL	P07196	543 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	HOXC9	P31274	260 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	POP1	Q99575	1024 aa	Known RBP	8.83	□□□□□ -1
HIPK1-210	ENST00000514621	DZANK1	Q9NVP4	752 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	POLK	Q9UBT6	870 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	8.83	□□□□□ -1
HIPK1-210	ENST00000514621	NPC1L1	Q9UHC9	1359 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	ANKRD26	Q9UPS8	1709 aa		8.83	□□□□□ -1
HIPK1-210	ENST00000514621	SPATA31A1	Q5TZJ5	1347 aa		8.82	□□□□□ -1
HIPK1-210	ENST00000514621	WDR17	Q8IZU2	1322 aa		8.82	□□□□□ -1
HIPK1-210	ENST00000514621	ABCC6	O95255	1503 aa		8.82	□□□□□ -1
HIPK1-210	ENST00000514621	PDE2A	O00408	941 aa	Predicted RBP	8.82	□□□□□ -1
HIPK1-210	ENST00000514621	EREG	O14944	169 aa		8.82	□□□□□ -1
HIPK1-210	ENST00000514621	FAM117B	Q6P1L5	589 aa		8.82	□□□□□ -1
HIPK1-210	ENST00000514621	SSBP4	Q9BWG4	385 aa	Predicted RBP	8.82	□□□□□ -1
HIPK1-210	ENST00000514621	ZFYVE28	Q9HCC9	887 aa		8.82	□□□□□ -1
HIPK1-210	ENST00000514621	BLM	P54132	1417 aa	Predicted RBP	8.81	□□□□□ -1
HIPK1-210	ENST00000514621	SOWAHD	A6NJG2	315 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	LINC01387	J3KSC0	135 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	PPM1G	O15355	546 aa	Predicted RBP	8.81	□□□□□ -1
HIPK1-210	ENST00000514621	SETDB1	Q15047	1291 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	HSP90AB2P	Q58FF8	381 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	ADAMTSL4	Q6UY14	1074 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	TOM1L2	Q6ZVM7	507 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	ANKRD24	Q8TF21	1146 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	LTV1	Q96GA3	475 aa	Predicted RBP	8.81	□□□□□ -1
HIPK1-210	ENST00000514621	OSMR	Q99650	979 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	ADAM19	Q9H013	955 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	USP35	Q9P2H5	1018 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	RTL1	A6NKG5	1358 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	KIF24	Q5T7B8	1368 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	CDK12	Q9NYV4	1490 aa	Predicted RBP	8.81	□□□□□ -1
HIPK1-210	ENST00000514621	GLI3	P10071	1580 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	LTN1	O94822	1766 aa		8.81	□□□□□ -1
HIPK1-210	ENST00000514621	CRB1	P82279	1406 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	NFKBIE	O00221	500 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	ACPP	P15309	386 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	NOS3	P29474	1203 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	CABP4	P57796	275 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	TCP11L2	Q8N4U5	519 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	TMEM102	Q8N9M5	508 aa	Predicted RBP	8.8	□□□□□ -1
HIPK1-210	ENST00000514621	WFDC12	Q8WWY7	111 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	CARD10	Q9BWT7	1032 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	MRPL18	Q9H0U6	180 aa	Known RBP	8.8	□□□□□ -1
HIPK1-210	ENST00000514621	FLT4	P35916	1363 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	PEAK1	Q9H792	1746 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	RGS12	O14924	1447 aa		8.8	□□□□□ -1
HIPK1-210	ENST00000514621	RGPD5	Q99666	1765 aa		8.79	□□□□□ -1
HIPK1-210	ENST00000514621	INSR	P06213	1382 aa		8.79	□□□□□ -1
HIPK1-210	ENST00000514621	ANP32C	O43423	234 aa		8.79	□□□□□ -1
HIPK1-210	ENST00000514621	FAM129B	Q96TA1	746 aa		8.79	□□□□□ -1
HIPK1-210	ENST00000514621	SH2B1	Q9NRF2	756 aa	Predicted RBP	8.79	□□□□□ -1
HIPK1-210	ENST00000514621	NLRP2	Q9NX02	1062 aa		8.79	□□□□□ -1
HIPK1-210	ENST00000514621	THRAP3	Q9Y2W1	955 aa	Known RBP	8.79	□□□□□ -1
HIPK1-210	ENST00000514621	H2AFB1	P0C5Y9	115 aa		8.78	□□□□□ -1
HIPK1-210	ENST00000514621	H2AFB2	P0C5Z0	115 aa		8.78	□□□□□ -1
HIPK1-210	ENST00000514621	EPHA1	P21709	976 aa		8.78	□□□□□ -1
HIPK1-210	ENST00000514621	CDC25B	P30305	580 aa		8.78	□□□□□ -1
HIPK1-210	ENST00000514621	IREB2	P48200	963 aa	Known RBP	8.78	□□□□□ -1
HIPK1-210	ENST00000514621	MTHFS	P49914	203 aa		8.78	□□□□□ -1
HIPK1-210	ENST00000514621	KLHL23	Q8NBE8	558 aa		8.78	□□□□□ -1
HIPK1-210	ENST00000514621	ZKSCAN3	Q9BRR0	538 aa		8.78	□□□□□ -1
HIPK1-210	ENST00000514621	BIN2	Q9UBW5	565 aa	Predicted RBP	8.78	□□□□□ -1
HIPK1-210	ENST00000514621	SMG6	Q86US8	1419 aa	Known RBP	8.78	□□□□□ -1
HIPK1-210	ENST00000514621	FSCN2	O14926	492 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	TRPA1	O75762	1119 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	KCNA1	Q09470	495 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	NBPF6	Q5VWK0	638 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	TXNDC11	Q6PKC3	985 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	NXPE3	Q969Y0	559 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	TP53INP1	Q96A56	240 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	MEGF10	Q96KG7	1140 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	NBPF4	Q96M43	638 aa		8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621	MAP2	P11137	1827 aa	Known RBP	8.77	□□□□□ -1.01
HIPK1-210	ENST00000514621		H3BRJ5	948 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	PPP2R1A	P30153	589 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	CD68	P34810	354 aa	Predicted RBP	8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	EIF4A2	Q14240	407 aa	Known RBP	8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	TMEM130	Q8N3G9	435 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	GALNT11	Q8NCW6	608 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	BSND	Q8WZ55	320 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	WNT8B	Q93098	351 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	DMRTB1	Q96MA1	342 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	HHIP	Q96QV1	700 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	TRAIP	Q9BWF2	469 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	AKTIP	Q9H8T0	292 aa		8.76	□□□□□ -1.01
HIPK1-210	ENST00000514621	PARD3	Q8TEW0	1356 aa		8.75	□□□□□ -1.01
HIPK1-210	ENST00000514621	DISP2	A7MBM2	1401 aa		8.75	□□□□□ -1.01
HIPK1-210	ENST00000514621		F8W735	103 aa	Predicted RBP	8.75	□□□□□ -1.01

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms