RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SLC27A2O14975 620 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 FOXP2O15409 715 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 PSMA5P28066 241 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 HSPA4P34932 840 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 PLCD1P51178 756 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 MKRN3Q13064 507 aaKnown RBP12.02□□□□□ -0.49
NEDD9-214ENST00000513989 PRKG1Q13976 671 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 AKNAD1Q5T1N1 836 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
NEDD9-214ENST00000513989 C22orf23Q9BZE7 217 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 KRT23Q9C075 422 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.02□□□□□ -0.492e-11■■□□□ 11.8
NEDD9-214ENST00000513989 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
NEDD9-214ENST00000513989 RBBP6Q7Z6E9 1792 aaKnown RBP12.01□□□□□ -0.49
NEDD9-214ENST00000513989 SEC24BO95487 1268 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 HMGB1P09429 215 aaKnown RBP12.01□□□□□ -0.49
NEDD9-214ENST00000513989 ANAPC15P60006 121 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 HAND2P61296 217 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 TTLL12Q14166 644 aaPredicted RBP12.01□□□□□ -0.49
NEDD9-214ENST00000513989 MAP3K11Q16584 847 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 SLC4A8Q2Y0W8 1093 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 TSGA10IPQ3SY00 556 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 MIGA2Q7L4E1 593 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
NEDD9-214ENST00000513989 RALYLQ86SE5 291 aaKnown RBP12.01□□□□□ -0.49
NEDD9-214ENST00000513989 ZNF296Q8WUU4 475 aaPredicted RBP12.01□□□□□ -0.49
NEDD9-214ENST00000513989 ATRNL1Q5VV63 1379 aa12.01□□□□□ -0.49
NEDD9-214ENST00000513989 CYP2D7A0A087X1C5 515 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 CYP21A2P08686 494 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 CYP2D6P10635 497 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 IREB2P48200 963 aaKnown RBP12□□□□□ -0.49
NEDD9-214ENST00000513989 CDK8P49336 464 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 MAP3K10Q02779 954 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 CTDSPL2Q05D32 466 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
NEDD9-214ENST00000513989 SPRYD7Q5W111 196 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 SH3BP5LQ7L8J4 393 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
NEDD9-214ENST00000513989 IL27Q8NEV9 243 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 STAG1Q8WVM7 1258 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 ESR2Q92731 530 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 CCDC17Q96LX7 622 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 TEPSINQ96N21 525 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 CFHR5Q9BXR6 569 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 CABP5Q9NP86 173 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 ANGEL1Q9UNK9 670 aaKnown RBP12□□□□□ -0.49
NEDD9-214ENST00000513989 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
NEDD9-214ENST00000513989 RANBP6O60518 1105 aaKnown RBP11.99□□□□□ -0.49
NEDD9-214ENST00000513989 SOX10P56693 466 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 CERKLQ49MI3 558 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-214ENST00000513989 CCDC178Q5BJE1 867 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 NOM1Q5C9Z4 860 aaKnown RBP11.99□□□□□ -0.49
NEDD9-214ENST00000513989 RRP12Q5JTH9 1297 aaKnown RBP11.99□□□□□ -0.49
NEDD9-214ENST00000513989 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 STK11IPQ8N1F8 1099 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 NCOA7Q8NI08 942 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 KCNB2Q92953 911 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 DYNLL2Q96FJ2 89 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 NEK1Q96PY6 1258 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
NEDD9-214ENST00000513989 COL2A1P02458 1487 aaPredicted RBP11.99□□□□□ -0.49
NEDD9-214ENST00000513989 UNCXA6NJT0 531 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 E7EWF7 191 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 GPR25O00155 361 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 FGRP09769 529 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 TSPY3P0CV98 308 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 TSPY8P0CW00 308 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 GJA5P36382 358 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 GABPAQ06546 454 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 SART3Q15020 963 aaKnown RBP11.98□□□□□ -0.49
NEDD9-214ENST00000513989 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
NEDD9-214ENST00000513989 DOCK2Q92608 1830 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 ERICH2A1L162 156 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 TSPY2A6NKD2 308 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 IGF2BP3O00425 579 aaKnown RBP eCLIP11.97□□□□□ -0.49
NEDD9-214ENST00000513989 MPHOSPH10O00566 681 aaKnown RBP11.97□□□□□ -0.49
NEDD9-214ENST00000513989 ORC4O43929 436 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 CTNND1O60716 968 aaKnown RBP11.97□□□□□ -0.49
NEDD9-214ENST00000513989 MCM5P33992 734 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
NEDD9-214ENST00000513989 MAP3K9P80192 1104 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 TFAP4Q01664 338 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 ABCB5Q2M3G0 1257 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 TATDN1Q6P1N9 297 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 IQCA1Q86XH1 822 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 RASEFQ8IZ41 740 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 PICK1Q9NRD5 415 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 CSADQ9Y600 493 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 AK9Q5TCS8 1911 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 MYH2Q9UKX2 1941 aa11.97□□□□□ -0.49
NEDD9-214ENST00000513989 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms