RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FAM47AQ5JRC9 791 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 MAPKAPK5Q8IW41 473 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 CERS5Q8N5B7 392 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 RNF26Q9BY78 433 aaPredicted RBP17.35■□□□□ 0.37
VCAN-211ENST00000513984 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
VCAN-211ENST00000513984 SNED1Q8TER0 1413 aa17.35■□□□□ 0.37
VCAN-211ENST00000513984 KIF13BQ9NQT8 1826 aa17.34■□□□□ 0.37
VCAN-211ENST00000513984 UBE2Q2LH0YL09 131 aa17.34■□□□□ 0.37
VCAN-211ENST00000513984 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
VCAN-211ENST00000513984 U2AF2P26368 475 aaKnown RBP eCLIP17.34■□□□□ 0.37
VCAN-211ENST00000513984 BICD2Q8TD16 824 aa17.34■□□□□ 0.37
VCAN-211ENST00000513984 C10orf71Q711Q0 1435 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 NMT2O60551 498 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 GUCY1A2P33402 732 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 BAG6P46379 1132 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 FUT2Q10981 343 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 DOK7Q18PE1 504 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 PODNQ7Z5L7 613 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 LINC00301Q8NCQ3 95 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 DYNLL2Q96FJ2 89 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 FUCA2Q9BTY2 467 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 NUP62CLQ9H1M0 184 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 DACT1Q9NYF0 836 aa17.33■□□□□ 0.37
VCAN-211ENST00000513984 PLCD1P51178 756 aa17.33■□□□□ 0.36
VCAN-211ENST00000513984 SLC4A8Q2Y0W8 1093 aa17.33■□□□□ 0.36
VCAN-211ENST00000513984 CCDC178Q5BJE1 867 aa17.33■□□□□ 0.36
VCAN-211ENST00000513984 DGKHQ86XP1 1220 aa17.33■□□□□ 0.36
VCAN-211ENST00000513984 ANKS1AQ92625 1134 aa17.33■□□□□ 0.36
VCAN-211ENST00000513984 TCP11L1Q9NUJ3 509 aa17.33■□□□□ 0.36
VCAN-211ENST00000513984 MMP1P03956 469 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 CHRNA5P30532 468 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 TFAP4Q01664 338 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 C16orf86Q6ZW13 317 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 KCNG4Q8TDN1 519 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 C7orf43Q8WVR3 580 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 MKNK2Q9HBH9 465 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 ZNF287Q9HBT7 754 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 SAP30BPQ9UHR5 308 aaKnown RBP17.32■□□□□ 0.36
VCAN-211ENST00000513984 CLIC4Q9Y696 253 aa17.32■□□□□ 0.36
VCAN-211ENST00000513984 PRPF3O43395 683 aaKnown RBP17.31■□□□□ 0.36
VCAN-211ENST00000513984 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
VCAN-211ENST00000513984 RBM43Q6ZSC3 357 aaKnown RBP17.31■□□□□ 0.36
VCAN-211ENST00000513984 TMTC3Q6ZXV5 915 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 CMTR1Q8N1G2 835 aaKnown RBP17.31■□□□□ 0.36
VCAN-211ENST00000513984 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
VCAN-211ENST00000513984 CLSTN2Q9H4D0 955 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 IL17RBQ9NRM6 502 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 TTF2Q9UNY4 1162 aaKnown RBP17.31■□□□□ 0.36
VCAN-211ENST00000513984 BAZ2BQ9UIF8 2168 aaKnown RBP17.31■□□□□ 0.36
VCAN-211ENST00000513984 G3V3G9 751 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 NR1I2O75469 434 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 RASA1P20936 1047 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
VCAN-211ENST00000513984 STK38Q15208 465 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 ANO1Q5XXA6 986 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 HHIPL2Q6UWX4 724 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 CCDC82Q8N4S0 544 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
VCAN-211ENST00000513984 PLEKHA8P1O95397 391 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 ME1P48163 572 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 GNL2Q13823 731 aaKnown RBP17.3■□□□□ 0.36
VCAN-211ENST00000513984 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 CC2D2BQ6DHV5 1058 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 ADALQ6DHV7 355 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 SLC44A5Q8NCS7 719 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
VCAN-211ENST00000513984 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 PCDHA7Q9UN72 937 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 CNTNAP5Q8WYK1 1306 aa17.3■□□□□ 0.36
VCAN-211ENST00000513984 A0A1W2PQ27 194 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 A0A1W2PQ64 194 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 A0A1W2PQD8 194 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 SPTLC2O15270 562 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 TSPY3P0CV98 308 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 TSPY8P0CW00 308 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
VCAN-211ENST00000513984 CCDC173Q0VFZ6 552 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
VCAN-211ENST00000513984 PKN1Q16512 942 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
VCAN-211ENST00000513984 ZNF444Q8N0Y2 327 aaPredicted RBP17.29■□□□□ 0.36
VCAN-211ENST00000513984 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
VCAN-211ENST00000513984 PPP1R9BQ96SB3 815 aa17.29■□□□□ 0.36
VCAN-211ENST00000513984 FOXP1Q9H334 677 aaPredicted RBP17.29■□□□□ 0.36
VCAN-211ENST00000513984 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
VCAN-211ENST00000513984 CDK8P49336 464 aa17.28■□□□□ 0.36
VCAN-211ENST00000513984 NOSTRINQ8IVI9 506 aa17.28■□□□□ 0.36
VCAN-211ENST00000513984 DIS3L2Q8IYB7 885 aaKnown RBP17.28■□□□□ 0.36
VCAN-211ENST00000513984 MXD3Q9BW11 206 aa17.28■□□□□ 0.36
VCAN-211ENST00000513984 TNMDQ9H2S6 317 aa17.28■□□□□ 0.36
VCAN-211ENST00000513984 GOLPH3LQ9H4A5 285 aa17.28■□□□□ 0.36
VCAN-211ENST00000513984 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
VCAN-211ENST00000513984 GREB1LQ9C091 1923 aaPredicted RBP17.28■□□□□ 0.36
VCAN-211ENST00000513984 SLC39A14Q15043 492 aa17.28■□□□□ 0.36
VCAN-211ENST00000513984 STRIP1Q5VSL9 837 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms