RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 LRRC26Q2I0M4 334 aa17.22■□□□□ 0.35
SPCS3-204ENST00000513139 LHX8Q68G74 356 aa17.22■□□□□ 0.35
SPCS3-204ENST00000513139 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
SPCS3-204ENST00000513139 GUCD1Q96NT3 240 aa17.22■□□□□ 0.35
SPCS3-204ENST00000513139 P2RX7Q99572 595 aaKnown RBP17.22■□□□□ 0.35
SPCS3-204ENST00000513139 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
SPCS3-204ENST00000513139 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
SPCS3-204ENST00000513139 ASNSP08243 561 aa17.21■□□□□ 0.35
SPCS3-204ENST00000513139 TIMM10P62072 90 aa17.21■□□□□ 0.35
SPCS3-204ENST00000513139 HERVK_113P62684 666 aa17.21■□□□□ 0.35
SPCS3-204ENST00000513139 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
SPCS3-204ENST00000513139 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.35
SPCS3-204ENST00000513139 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
SPCS3-204ENST00000513139 GTF3C2Q8WUA4 911 aaPredicted RBP17.21■□□□□ 0.35
SPCS3-204ENST00000513139 TXNRD2Q9NNW7 524 aa17.21■□□□□ 0.35
SPCS3-204ENST00000513139 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
SPCS3-204ENST00000513139 SPTBN5Q9NRC6 3674 aaKnown RBP17.2■□□□□ 0.34
SPCS3-204ENST00000513139 LTBP2Q14767 1821 aa17.2■□□□□ 0.34
SPCS3-204ENST00000513139 RGS2P41220 211 aa17.2■□□□□ 0.34
SPCS3-204ENST00000513139 MTMR2Q13614 643 aa17.2■□□□□ 0.34
SPCS3-204ENST00000513139 NSUN4Q96CB9 384 aaKnown RBP17.2■□□□□ 0.34
SPCS3-204ENST00000513139 DHX36Q9H2U1 1008 aaKnown RBP17.2■□□□□ 0.34
SPCS3-204ENST00000513139 GINM1Q9NU53 330 aa17.2■□□□□ 0.34
SPCS3-204ENST00000513139 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
SPCS3-204ENST00000513139 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
SPCS3-204ENST00000513139 PA2G4Q9UQ80 394 aaKnown RBP17.2■□□□□ 0.34
SPCS3-204ENST00000513139 TTC28Q96AY4 2481 aa17.2■□□□□ 0.34
SPCS3-204ENST00000513139 RLFQ13129 1914 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 A0A1B0GUL7 405 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 CCND3P30281 292 aaPredicted RBP17.19■□□□□ 0.34
SPCS3-204ENST00000513139 ERVK-9P63128 1117 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 ERVK-24P63145 666 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 MORN1Q5T089 497 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 XAGE2Q96GT9 111 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 APBA2Q99767 749 aa17.19■□□□□ 0.34
SPCS3-204ENST00000513139 LBHD1Q9BQE6 289 aaPredicted RBP17.19■□□□□ 0.34
SPCS3-204ENST00000513139 CDH23Q9H251 3354 aa17.18■□□□□ 0.34
SPCS3-204ENST00000513139 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
SPCS3-204ENST00000513139 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
SPCS3-204ENST00000513139 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
SPCS3-204ENST00000513139 CCL14Q16627 93 aa17.17■□□□□ 0.34
SPCS3-204ENST00000513139 Q3C1V9 767 aa17.17■□□□□ 0.34
SPCS3-204ENST00000513139 PLEKHH3Q7Z736 793 aa17.17■□□□□ 0.34
SPCS3-204ENST00000513139 METTL16Q86W50 562 aaKnown RBP17.17■□□□□ 0.34
SPCS3-204ENST00000513139 TEX11Q8IYF3 940 aa17.17■□□□□ 0.34
SPCS3-204ENST00000513139 PORCNQ9H237 461 aa17.17■□□□□ 0.34
SPCS3-204ENST00000513139 HMG20BQ9P0W2 317 aa17.17■□□□□ 0.34
SPCS3-204ENST00000513139 MSCO60682 206 aa17.16■□□□□ 0.34
SPCS3-204ENST00000513139 ZNF697Q5TEC3 545 aa17.16■□□□□ 0.34
SPCS3-204ENST00000513139 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
SPCS3-204ENST00000513139 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
SPCS3-204ENST00000513139 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
SPCS3-204ENST00000513139 E9PSI1 815 aa17.15■□□□□ 0.34
SPCS3-204ENST00000513139 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
SPCS3-204ENST00000513139 PEX10O60683 326 aa17.15■□□□□ 0.34
SPCS3-204ENST00000513139 GLRX3O76003 335 aaKnown RBP17.15■□□□□ 0.34
SPCS3-204ENST00000513139 MAP2K5Q13163 448 aa17.15■□□□□ 0.34
SPCS3-204ENST00000513139 NOL10Q9BSC4 688 aaKnown RBP17.15■□□□□ 0.34
SPCS3-204ENST00000513139 RAI14Q9P0K7 980 aa17.15■□□□□ 0.34
SPCS3-204ENST00000513139 MYO5AQ9Y4I1 1855 aaKnown RBP17.15■□□□□ 0.34
SPCS3-204ENST00000513139 MYH1P12882 1939 aa17.15■□□□□ 0.34
SPCS3-204ENST00000513139 PLCG2P16885 1265 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
SPCS3-204ENST00000513139 CCNA1P78396 465 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 TFCP2Q12800 502 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 MFSD14CQ5VZR4 134 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 TBC1D9Q6ZT07 1266 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
SPCS3-204ENST00000513139 LPAR1Q92633 364 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
SPCS3-204ENST00000513139 FAM161BQ96MY7 647 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 PRKAG2Q9UGJ0 569 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 RABGAP1Q9Y3P9 1069 aa17.14■□□□□ 0.33
SPCS3-204ENST00000513139 MUC3AQ02505 3323 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 DNM1LO00429 736 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 BAG3O95817 575 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 JAG1P78504 1218 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 POTEEQ6S8J3 1075 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 PAGR1Q9BTK6 254 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 DNAJC18Q9H819 358 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 SMC4Q9NTJ3 1288 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
SPCS3-204ENST00000513139 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
SPCS3-204ENST00000513139 SLC15A5A6NIM6 579 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 HOXC6P09630 235 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 PPP4CP60510 307 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 MTX1Q13505 466 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 GORABQ5T7V8 394 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 CRACR2BQ8N4Y2 399 aaPredicted RBP17.12■□□□□ 0.33
SPCS3-204ENST00000513139 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
SPCS3-204ENST00000513139 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
SPCS3-204ENST00000513139 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 ZBTB21Q9ULJ3 1066 aa17.12■□□□□ 0.33
SPCS3-204ENST00000513139 IGSF3O75054 1194 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms