RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 RUFY2Q8WXA3 655 aa20.77■□□□□ 0.92
DDR1-270ENST00000513043 THSD7BQ9C0I4 1608 aa20.77■□□□□ 0.92
DDR1-270ENST00000513043 DOCK1Q14185 1865 aa20.77■□□□□ 0.92
DDR1-270ENST00000513043 GH2P01242 217 aa20.76■□□□□ 0.91
DDR1-270ENST00000513043 PPATQ06203 517 aa20.76■□□□□ 0.91
DDR1-270ENST00000513043 PPIL2Q13356 520 aa20.76■□□□□ 0.91
DDR1-270ENST00000513043 C16orf86Q6ZW13 317 aa20.76■□□□□ 0.91
DDR1-270ENST00000513043 SWAP70Q9UH65 585 aa20.76■□□□□ 0.91
DDR1-270ENST00000513043 MPHOSPH10O00566 681 aaKnown RBP20.75■□□□□ 0.91
DDR1-270ENST00000513043 FGAP02671 866 aa20.75■□□□□ 0.91
DDR1-270ENST00000513043 PPARAQ07869 468 aa20.75■□□□□ 0.91
DDR1-270ENST00000513043 ZBTB21Q9ULJ3 1066 aa20.75■□□□□ 0.91
DDR1-270ENST00000513043 MANSC4A6NHS7 340 aaPredicted RBP20.74■□□□□ 0.91
DDR1-270ENST00000513043 ASNSP08243 561 aa20.74■□□□□ 0.91
DDR1-270ENST00000513043 CTDSPL2Q05D32 466 aa20.74■□□□□ 0.91
DDR1-270ENST00000513043 ALX1Q15699 326 aa20.74■□□□□ 0.91
DDR1-270ENST00000513043 ABCB5Q2M3G0 1257 aa20.74■□□□□ 0.91
DDR1-270ENST00000513043 LAMB1P07942 1786 aa20.74■□□□□ 0.91
DDR1-270ENST00000513043 RAD50Q92878 1312 aa20.74■□□□□ 0.91
DDR1-270ENST00000513043 ATAD5Q96QE3 1844 aa20.74■□□□□ 0.91
DDR1-270ENST00000513043 TRIM75PA6NK02 468 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 USP17L5A8MUK1 530 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 SGSM2O43147 1006 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 PRDM1O75626 825 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 AKR1B1P15121 316 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 HAND2P61296 217 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 MAP2K1Q02750 393 aaPredicted RBP20.73■□□□□ 0.91
DDR1-270ENST00000513043 RAB3GAP1Q15042 981 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 MS4A4AQ96JQ5 239 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 CABP5Q9NP86 173 aa20.73■□□□□ 0.91
DDR1-270ENST00000513043 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 CCL15-CCL14A0A0B4J2E2 113 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 GTF2A2P52657 109 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 SREBF2Q12772 1141 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 SNAPC2Q13487 334 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 CCL15Q16663 113 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 MKNK2Q9HBH9 465 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 AFG3L2Q9Y4W6 797 aa20.72■□□□□ 0.91
DDR1-270ENST00000513043 CDC45O75419 566 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 SPP2Q13103 211 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 SEPT2Q15019 361 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 BRI3BPQ8WY22 251 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 BEGAINQ9BUH8 593 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 DSCC1Q9BVC3 393 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 INCENPQ9NQS7 918 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 WBP1LQ9NX94 342 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 KCNH4Q9UQ05 1017 aa20.71■□□□□ 0.91
DDR1-270ENST00000513043 SLC3A2P08195 630 aaKnown RBP20.7■□□□□ 0.9
DDR1-270ENST00000513043 RASA1P20936 1047 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 TM4SF4P48230 202 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 PTH1RQ03431 593 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 CLEC10AQ8IUN9 316 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 ZNF280CQ8ND82 737 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 ESYT1Q9BSJ8 1104 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 GINM1Q9NU53 330 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 TSKSQ9UJT2 592 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 ZMYM6O95789 1325 aa20.7■□□□□ 0.9
DDR1-270ENST00000513043 IGF2BP3O00425 579 aaKnown RBP eCLIP20.69■□□□□ 0.9
DDR1-270ENST00000513043 CXCL11O14625 94 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 FOXN1O15353 648 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 CETPP11597 493 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 GUCY1A2P33402 732 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 PDE4BQ07343 736 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 CASC1Q6TDU7 716 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 IFNL1Q8IU54 200 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 REM2Q8IYK8 340 aaPredicted RBP20.69■□□□□ 0.9
DDR1-270ENST00000513043 CCDC17Q96LX7 622 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 PTPN18Q99952 460 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 TAOK2Q9UL54 1235 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 TACC3Q9Y6A5 838 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 PHIPQ8WWQ0 1821 aa20.69■□□□□ 0.9
DDR1-270ENST00000513043 MYH8P13535 1937 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 TRPA1O75762 1119 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 INHBEP58166 350 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 DGKZQ13574 1117 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 GADL1Q6ZQY3 521 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 TMEM179Q6ZVK1 233 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 ZNF287Q9HBT7 754 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 TOMM22Q9NS69 142 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 RNF186Q9NXI6 227 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 ANAPC4Q9UJX5 808 aa20.68■□□□□ 0.9
DDR1-270ENST00000513043 TESPA1A2RU30 521 aaPredicted RBP20.67■□□□□ 0.9
DDR1-270ENST00000513043 HMGCS2P54868 508 aa20.67■□□□□ 0.9
DDR1-270ENST00000513043 MTMR2Q13614 643 aa20.67■□□□□ 0.9
DDR1-270ENST00000513043 ZYXQ15942 572 aaKnown RBP20.67■□□□□ 0.9
DDR1-270ENST00000513043 FAM47AQ5JRC9 791 aa20.67■□□□□ 0.9
DDR1-270ENST00000513043 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
DDR1-270ENST00000513043 ZNF444Q8N0Y2 327 aaPredicted RBP20.67■□□□□ 0.9
DDR1-270ENST00000513043 WDR18Q9BV38 432 aa20.67■□□□□ 0.9
DDR1-270ENST00000513043 NBPF3Q9H094 633 aa20.67■□□□□ 0.9
DDR1-270ENST00000513043 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
DDR1-270ENST00000513043 A0A0G2JLL6 359 aaPredicted RBP20.66■□□□□ 0.9
DDR1-270ENST00000513043 BTBD19C9JJ37 291 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 ZNF213O14771 459 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 RRP12Q5JTH9 1297 aaKnown RBP20.66■□□□□ 0.9
DDR1-270ENST00000513043 PRRT2Q7Z6L0 340 aaPredicted RBP20.66■□□□□ 0.9
DDR1-270ENST00000513043 TBC1D10CQ8IV04 446 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 FAM43AQ8N2R8 423 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 ACER1Q8TDN7 264 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms