RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 DLK2Q6UY11 383 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 RASAL3Q86YV0 1011 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 ANKRD18AQ8IVF6 992 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
MSH3-203ENST00000512531 MYOZ2Q9NPC6 264 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 SEC31BQ9NQW1 1179 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 PAG1Q9NWQ8 432 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 DBNLQ9UJU6 430 aaKnown RBP11.2□□□□□ -0.62
MSH3-203ENST00000512531 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
MSH3-203ENST00000512531 BRD1O95696 1058 aa11.19□□□□□ -0.62
MSH3-203ENST00000512531 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
MSH3-203ENST00000512531 NUDT18Q6ZVK8 323 aa11.19□□□□□ -0.62
MSH3-203ENST00000512531 CDC5LQ99459 802 aaKnown RBP11.19□□□□□ -0.62
MSH3-203ENST00000512531 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
MSH3-203ENST00000512531 GZF1Q9H116 711 aaPredicted RBP11.19□□□□□ -0.62
MSH3-203ENST00000512531 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
MSH3-203ENST00000512531 BSDC1Q9NW68 430 aaPredicted RBP11.19□□□□□ -0.62
MSH3-203ENST00000512531 COL4A1P02462 1669 aa11.19□□□□□ -0.62
MSH3-203ENST00000512531 MED23Q9ULK4 1368 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 SLC27A2O14975 620 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 LETM1O95202 739 aaPredicted RBP11.18□□□□□ -0.62
MSH3-203ENST00000512531 UQCRFS1P1P0C7P4 283 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 TM4SF4P48230 202 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 AK2P54819 239 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
MSH3-203ENST00000512531 KLHDC4Q8TBB5 520 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 TTC14Q96N46 770 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 DBNDD2Q9BQY9 259 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
MSH3-203ENST00000512531 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
MSH3-203ENST00000512531 MROH5Q6ZUA9 1318 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 CSF1RP07333 972 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 ABL2P42684 1182 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 CTSWP56202 376 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 METTL24Q5JXM2 366 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 STRIP1Q5VSL9 837 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 OGFOD1Q8N543 542 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 ZGPATQ8N5A5 531 aaKnown RBP11.17□□□□□ -0.62
MSH3-203ENST00000512531 ADAMTS19Q8TE59 1207 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 NEK1Q96PY6 1258 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
MSH3-203ENST00000512531 TLR7Q9NYK1 1049 aaKnown RBP11.17□□□□□ -0.62
MSH3-203ENST00000512531 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
MSH3-203ENST00000512531 GOLIM4O00461 696 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 RNF113AO15541 343 aaKnown RBP11.16□□□□□ -0.62
MSH3-203ENST00000512531 STX6O43752 255 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 TAF5LO75529 589 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 RPS6KB1P23443 525 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 NF2P35240 595 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 PTH1RQ03431 593 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 DACT2Q5SW24 774 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 PRPF38BQ5VTL8 546 aaKnown RBP11.16□□□□□ -0.62
MSH3-203ENST00000512531 LDHAL6AQ6ZMR3 332 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 ATG9AQ7Z3C6 839 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 TTLL11Q8NHH1 800 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 JARID2Q92833 1246 aaPredicted RBP11.16□□□□□ -0.62
MSH3-203ENST00000512531 TRIM44Q96DX7 344 aaPredicted RBP11.16□□□□□ -0.62
MSH3-203ENST00000512531 ZNF512BQ96KM6 892 aaPredicted RBP11.16□□□□□ -0.62
MSH3-203ENST00000512531 FAM227BQ96M60 508 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 MINPP1Q9UNW1 487 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 LEMD3Q9Y2U8 911 aa11.16□□□□□ -0.62
MSH3-203ENST00000512531 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
MSH3-203ENST00000512531 A0A0D9SFI3 127 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 FSD2A1L4K1 749 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 UNCXA6NJT0 531 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 SMAPO00193 183 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 PRPF40AO75400 957 aaKnown RBP11.15□□□□□ -0.62
MSH3-203ENST00000512531 AP1G2O75843 785 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 ZSCAN22P10073 491 aaPredicted RBP11.15□□□□□ -0.62
MSH3-203ENST00000512531 SREBF2Q12772 1141 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 ATP2B3Q16720 1220 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 MPHOSPH8Q99549 860 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 MYH3P11055 1940 aa11.15□□□□□ -0.62
MSH3-203ENST00000512531 COL1A1P02452 1464 aaPredicted RBP11.14□□□□□ -0.63
MSH3-203ENST00000512531 WNT10BO00744 389 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
MSH3-203ENST00000512531 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 SLC5A1P13866 664 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 ITGA6P23229 1130 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 IGHMBP2P38935 993 aaKnown RBP11.14□□□□□ -0.63
MSH3-203ENST00000512531 INHBEP58166 350 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 ZNF445P59923 1031 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 HMGN5P82970 282 aaKnown RBP11.14□□□□□ -0.63
MSH3-203ENST00000512531 IMMTQ16891 758 aaKnown RBP11.14□□□□□ -0.63
MSH3-203ENST00000512531 APOBEC3FQ8IUX4 373 aaKnown RBP11.14□□□□□ -0.63
MSH3-203ENST00000512531 ZNF710Q8N1W2 664 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
MSH3-203ENST00000512531 GLMNQ92990 594 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 TATDN2Q93075 761 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 HLA-CQ95604 372 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 LMBRD1Q9NUN5 540 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 HDAC9Q9UKV0 1011 aa11.14□□□□□ -0.63
MSH3-203ENST00000512531 HPS5Q9UPZ3 1129 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms