RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 PEX10O60683 326 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 RGS3P49796 1198 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 ERVK-9P63128 1117 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 ERVK-24P63145 666 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 FOXK2Q01167 660 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 CAVIN4Q5BKX8 364 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 RASIP1Q5U651 963 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 CCDC129Q6ZRS4 1044 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 C8orf58Q8NAV2 365 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 LINS1Q8NG48 757 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■□□□□ 9.7
DEPDC1B-205ENST00000512078 USP40Q9NVE5 1235 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 ZNF236Q9UL36 1845 aa9.78□□□□□ -0.84
DEPDC1B-205ENST00000512078 A0A0G2JMZ2 1700 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 GRXCR1A8MXD5 290 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 TLL1O43897 1013 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 SLURP2P0DP57 97 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 CYBAP13498 195 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 HOXA7P31268 230 aaPredicted RBP9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 HERVK_113P62684 666 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 DIXDC1Q155Q3 683 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 RAB30Q15771 203 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 Q3C1V9 767 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 LMBR1LQ6UX01 489 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 CCAR1Q8IX12 1150 aaKnown RBP9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 TRPV1Q8NER1 839 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 HERVK_113Q902F9 699 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 EDC3Q96F86 508 aaKnown RBP9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 OSBPL5Q9H0X9 879 aaPredicted RBP9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 IFT57Q9NWB7 429 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 RBPJLQ9UBG7 517 aa9.77□□□□□ -0.85
DEPDC1B-205ENST00000512078 DDTLA6NHG4 134 aaPredicted RBP9.76□□□□□ -0.85
DEPDC1B-205ENST00000512078 TBC1D12O60347 775 aa9.76□□□□□ -0.85
DEPDC1B-205ENST00000512078 IGHA2P01877 340 aa9.76□□□□□ -0.85
DEPDC1B-205ENST00000512078 HOXC6P09630 235 aa9.76□□□□□ -0.85
DEPDC1B-205ENST00000512078 ADCYAP1R1P41586 468 aa9.76□□□□□ -0.85
DEPDC1B-205ENST00000512078 GTF3C2Q8WUA4 911 aaPredicted RBP9.76□□□□□ -0.85
DEPDC1B-205ENST00000512078 MROH5Q6ZUA9 1318 aa9.76□□□□□ -0.85
DEPDC1B-205ENST00000512078 GNAI1P63096 354 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 EPHA10Q5JZY3 1008 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 G2E3Q7L622 706 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 CCDC146Q8IYE0 955 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 MICALL1Q8N3F8 863 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 WDR66Q8TBY9 1149 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 FBXL18Q96ME1 805 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 PUS3Q9BZE2 481 aaKnown RBP9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 MSRAQ9UJ68 235 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 COG5Q9UP83 839 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 KIF16BQ96L93 1317 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 TRANK1O15050 2925 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 GLRX3O76003 335 aaKnown RBP9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 CYP2C19P33261 490 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 ATP2B2Q01814 1243 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 SKIV2LQ15477 1246 aaKnown RBP9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 CCDC174Q6PII3 467 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 DNAAF4Q8WXU2 420 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 FERMT2Q96AC1 680 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 STK31Q9BXU1 1019 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 AS3MTQ9HBK9 375 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 PHF24Q9UPV7 400 aa9.75□□□□□ -0.85
DEPDC1B-205ENST00000512078 WDFY4Q6ZS81 3184 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 SIPA1L1O43166 1804 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 SLC15A5A6NIM6 579 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 USP17L5A8MUK1 530 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 LRRC41Q15345 812 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 TMEM240Q5SV17 173 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 RUNDC1Q96C34 613 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 NKX2-4Q9H2Z4 354 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 SLC28A3Q9HAS3 691 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 CWC22Q9HCG8 908 aaKnown RBP9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 TMEM39AQ9NV64 488 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 SPTBN4Q9H254 2564 aa9.74□□□□□ -0.85
DEPDC1B-205ENST00000512078 ZNFX1Q9P2E3 1918 aaKnown RBP9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 SEPT4O43236 478 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 ST18O60284 1047 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 TIMP1P01033 207 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 POU3F3P20264 500 aaPredicted RBP9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 PTPREP23469 700 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 PRDX5P30044 214 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 ZEB1P37275 1124 aaPredicted RBP9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 PPIGQ13427 754 aaKnown RBP eCLIP9.73□□□□□ -0.857e-8■□□□□ 9.6
DEPDC1B-205ENST00000512078 GRB14Q14449 540 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 ANO1Q5XXA6 986 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 C16orf59Q7L2K0 433 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 VGLL2Q8N8G2 317 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 SLC44A5Q8NCS7 719 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 NPLOC4Q8TAT6 608 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 TOX2Q96NM4 488 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 PAGR1Q9BTK6 254 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 WDR18Q9BV38 432 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 CD320Q9NPF0 282 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 TMOD4Q9NZQ9 345 aa9.73□□□□□ -0.85
DEPDC1B-205ENST00000512078 ZBTB22O15209 634 aa9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 PQBP1O60828 265 aaKnown RBP9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 MYCNP04198 464 aaPredicted RBP9.72□□□□□ -0.85
DEPDC1B-205ENST00000512078 SLC4A2P04920 1241 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms