RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MX1P20591 662 aa19.9■□□□□ 0.78
DDX41-213ENST00000512027 C17orf99Q6UX52 265 aa19.9■□□□□ 0.78
DDX41-213ENST00000512027 FASTKD5Q7L8L6 764 aaKnown RBP19.9■□□□□ 0.78
DDX41-213ENST00000512027 TTC6Q86TZ1 520 aa19.9■□□□□ 0.78
DDX41-213ENST00000512027 EHD4Q9H223 541 aa19.9■□□□□ 0.78
DDX41-213ENST00000512027 EFCC1Q9HA90 598 aa19.9■□□□□ 0.78
DDX41-213ENST00000512027 MGAMO43451 1857 aa19.9■□□□□ 0.78
DDX41-213ENST00000512027 CYP2D7A0A087X1C5 515 aa19.89■□□□□ 0.77
DDX41-213ENST00000512027 GH2P01242 217 aa19.89■□□□□ 0.77
DDX41-213ENST00000512027 ASNSP08243 561 aa19.89■□□□□ 0.77
DDX41-213ENST00000512027 CTGFP29279 349 aa19.89■□□□□ 0.77
DDX41-213ENST00000512027 SHMT1P34896 483 aa19.89■□□□□ 0.77
DDX41-213ENST00000512027 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
DDX41-213ENST00000512027 TATDN1Q6P1N9 297 aa19.89■□□□□ 0.77
DDX41-213ENST00000512027 TTC41PQ6P2S7 1318 aa19.89■□□□□ 0.77
DDX41-213ENST00000512027 PARK7Q99497 189 aaKnown RBP19.89■□□□□ 0.77
DDX41-213ENST00000512027 IGHDP01880 384 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 SOX10P56693 466 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 MTMR2Q13614 643 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 ZSCAN25Q6NSZ9 544 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 SLC44A5Q8NCS7 719 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 OSBP2Q969R2 916 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 GCC1Q96CN9 775 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 DYNLL2Q96FJ2 89 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 AGTPBP1Q9UPW5 1226 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 SLC4A4Q9Y6R1 1079 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 CENPFP49454 3210 aa19.88■□□□□ 0.77
DDX41-213ENST00000512027 LACTBP83111 547 aaPredicted RBP19.87■□□□□ 0.77
DDX41-213ENST00000512027 B4GALNT3Q6L9W6 998 aa19.87■□□□□ 0.77
DDX41-213ENST00000512027 AS3MTQ9HBK9 375 aa19.87■□□□□ 0.77
DDX41-213ENST00000512027 PTPN22Q9Y2R2 807 aa19.87■□□□□ 0.77
DDX41-213ENST00000512027 ERC2O15083 957 aa19.86■□□□□ 0.77
DDX41-213ENST00000512027 RNF113AO15541 343 aaKnown RBP19.86■□□□□ 0.77
DDX41-213ENST00000512027 GABPAQ06546 454 aa19.86■□□□□ 0.77
DDX41-213ENST00000512027 CERKLQ49MI3 558 aaPredicted RBP19.86■□□□□ 0.77
DDX41-213ENST00000512027 PROCA1Q8NCQ7 364 aaPredicted RBP19.86■□□□□ 0.77
DDX41-213ENST00000512027 WDR18Q9BV38 432 aa19.86■□□□□ 0.77
DDX41-213ENST00000512027 ZBTB47Q9UFB7 747 aaPredicted RBP19.86■□□□□ 0.77
DDX41-213ENST00000512027 M0R2C6 588 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 GLRX3O76003 335 aaKnown RBP19.85■□□□□ 0.77
DDX41-213ENST00000512027 BCRP11274 1271 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 RAB3GAP1Q15042 981 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 ZYXQ15942 572 aaKnown RBP19.85■□□□□ 0.77
DDX41-213ENST00000512027 ABCB5Q2M3G0 1257 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 SH3D19Q5HYK7 790 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 SEC62Q99442 399 aaKnown RBP19.85■□□□□ 0.77
DDX41-213ENST00000512027 TBC1D2Q9BYX2 928 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 LNPKQ9C0E8 428 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 ATP8A2Q9NTI2 1148 aa19.85■□□□□ 0.77
DDX41-213ENST00000512027 USP17L12C9JPN9 530 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 USP17L21D6R901 530 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 GUCY1A2P33402 732 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 BACE1P56817 501 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 AAMPQ13685 434 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 APPBP2Q92624 585 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 TRIM47Q96LD4 638 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 STRBPQ96SI9 672 aaKnown RBP19.84■□□□□ 0.77
DDX41-213ENST00000512027 FSD1Q9BTV5 496 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 RWDD1Q9H446 243 aaPredicted RBP19.84■□□□□ 0.77
DDX41-213ENST00000512027 SLC45A1Q9Y2W3 748 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 PTCH2Q9Y6C5 1203 aa19.84■□□□□ 0.77
DDX41-213ENST00000512027 USP17L10C9JJH3 530 aa19.83■□□□□ 0.77
DDX41-213ENST00000512027 PSMC4P43686 418 aa19.83■□□□□ 0.77
DDX41-213ENST00000512027 KIF22Q14807 665 aa19.83■□□□□ 0.77
DDX41-213ENST00000512027 SMC5Q8IY18 1101 aa19.83■□□□□ 0.77
DDX41-213ENST00000512027 ACER1Q8TDN7 264 aa19.83■□□□□ 0.77
DDX41-213ENST00000512027 SMCR8Q8TEV9 937 aaPredicted RBP19.83■□□□□ 0.77
DDX41-213ENST00000512027 GINM1Q9NU53 330 aa19.83■□□□□ 0.77
DDX41-213ENST00000512027 MPHOSPH10O00566 681 aaKnown RBP19.82■□□□□ 0.76
DDX41-213ENST00000512027 GPAA1O43292 621 aa19.82■□□□□ 0.76
DDX41-213ENST00000512027 PDE1AP54750 535 aa19.82■□□□□ 0.76
DDX41-213ENST00000512027 SEPT2Q15019 361 aa19.82■□□□□ 0.76
DDX41-213ENST00000512027 C12orf60Q5U649 245 aa19.82■□□□□ 0.76
DDX41-213ENST00000512027 CTR9Q6PD62 1173 aa19.82■□□□□ 0.76
DDX41-213ENST00000512027 CLEC10AQ8IUN9 316 aa19.82■□□□□ 0.76
DDX41-213ENST00000512027 ASCC2Q9H1I8 757 aaPredicted RBP19.82■□□□□ 0.76
DDX41-213ENST00000512027 TMOD4Q9NZQ9 345 aa19.82■□□□□ 0.76
DDX41-213ENST00000512027 TNRC18O15417 2968 aaPredicted RBP19.82■□□□□ 0.76
DDX41-213ENST00000512027 GSG1L2A8MUP6 293 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 PEX10O60683 326 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 FMNL1O95466 1100 aaPredicted RBP19.81■□□□□ 0.76
DDX41-213ENST00000512027 ZFYP08048 801 aaPredicted RBP19.81■□□□□ 0.76
DDX41-213ENST00000512027 STK11IPQ8N1F8 1099 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 ANKRD13CQ8N6S4 541 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 FEZ1Q99689 392 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 EPB41L4AQ9HCS5 686 aaPredicted RBP19.81■□□□□ 0.76
DDX41-213ENST00000512027 CABP5Q9NP86 173 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 EMILIN3Q9NT22 766 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 STAP2Q9UGK3 403 aa19.81■□□□□ 0.76
DDX41-213ENST00000512027 AKR1B1P15121 316 aa19.8■□□□□ 0.76
DDX41-213ENST00000512027 OSBPP22059 807 aa19.8■□□□□ 0.76
DDX41-213ENST00000512027 PNMA3Q9UL41 463 aa19.8■□□□□ 0.76
DDX41-213ENST00000512027 C19orf81C9J6K1 198 aa19.79■□□□□ 0.76
DDX41-213ENST00000512027 CDK8P49336 464 aa19.79■□□□□ 0.76
DDX41-213ENST00000512027 ARHGEF6Q15052 776 aa19.79■□□□□ 0.76
DDX41-213ENST00000512027 CCDC129Q6ZRS4 1044 aa19.79■□□□□ 0.76
DDX41-213ENST00000512027 DDRGK1Q96HY6 314 aa19.79■□□□□ 0.76
DDX41-213ENST00000512027 DOCK3Q8IZD9 2030 aa19.79■□□□□ 0.76
DDX41-213ENST00000512027 MYCP01106 439 aaPredicted RBP19.78■□□□□ 0.76
DDX41-213ENST00000512027 IRX3P78415 501 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms