RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 HLFQ16534 295 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 SCARA3Q6AZY7 606 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 LINC00116Q8NCU8 138 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 MYRIPQ8NFW9 859 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF428Q96B54 188 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CCDC34Q96HJ3 373 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 STRA6Q9BX79 667 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 RNF216Q9NWF9 866 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 STAG3Q9UJ98 1225 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 FAT2Q9NYQ8 4349 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 TPRP12270 2363 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 KLRC4O43908 158 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 RANBP6O60518 1105 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 POTEJP0CG39 1038 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 HOXD8P13378 290 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 HDLBPQ00341 1268 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 PKN1Q16512 942 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CST9Q5W186 159 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CGB2Q6NT52 195 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CDC37L1Q7L3B6 337 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 EAF2Q96CJ1 260 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 SRCIN1Q9C0H9 1055 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 NOB1Q9ULX3 412 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 SNX14Q9Y5W7 946 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 VWA3AA6NCI4 1184 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 OPLAHO14841 1288 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 WDHD1O75717 1129 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 LCA5LO95447 670 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 SCNN1DP51172 638 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 DOC2BQ14184 412 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 FAM50AQ14320 339 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 PKN2Q16513 984 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 FOXB2Q5VYV0 432 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 TYW1BQ6NUM6 668 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 ADGRA1Q86SQ6 560 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 CCDC146Q8IYE0 955 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF507Q8TCN5 953 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 BTBD2Q9BX70 525 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 GPR88Q9GZN0 384 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 BTG4Q9NY30 223 aa2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 GCN1Q92616 2671 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-211ENST00000512009 ATG2BQ96BY7 2078 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 LOC102724159A0A0B4J2E5 919 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 SYF2O95926 243 aaKnown RBP2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 ALADP13716 330 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 PWP2Q15269 919 aaKnown RBP2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 SYCP1Q15431 976 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 ME3Q16798 604 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 USP48Q86UV5 1035 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 CHD1LQ86WJ1 897 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 PIGBQ92521 554 aa2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 FTOQ9C0B1 505 aaKnown RBP eCLIP2.03□□□□□ -2.09
TRAPPC13-211ENST00000512009 DOCK6Q96HP0 2047 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 GOLGA6L22H0YM25 854 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ALDH1L1O75891 902 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 CLSTN1O94985 981 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ALDH2P05091 517 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 PRMT2P55345 433 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 NFE2L2Q16236 605 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZCWPW2Q504Y3 356 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ANKRD23Q86SG2 305 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 TDRD7Q8NHU6 1098 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 UTP4Q969X6 686 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 RC3H2Q9HBD1 1191 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 CIZ1Q9ULV3 898 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 LIG1P18858 919 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZNF662Q6ZS27 426 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 AGGF1Q8N302 714 aaeCLIP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 OR6Y1Q8NGX8 325 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 CENPTQ96BT3 561 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 TM6SF1Q9BZW5 370 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 RTEL1Q9NZ71 1219 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 SLC12A6Q9UHW9 1150 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 PTPRBP23467 1997 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 EXPH5Q8NEV8 1989 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 TECTAO75443 2155 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ESPNB1AK53 854 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 U2SURPO15042 1029 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 KIAA2012Q0VF49 1180 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 SEC23AQ15436 765 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZNF496Q96IT1 587 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZMYM2Q9UBW7 1377 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 A0A087WWV3 80 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 TAF5LO75529 589 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 NTSR2O95665 410 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 CD1EP15812 388 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 GM2AP17900 193 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 CYP2C19P33261 490 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 HMGN5P82970 282 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 CTBSQ01459 385 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 KCNC3Q14003 757 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 DAB2IPQ5VWQ8 1189 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 CCSAPQ6IQ19 270 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 SYNE3Q6ZMZ3 975 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 STK11IPQ8N1F8 1099 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 MORC4Q8TE76 937 aa2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 PAK6Q9NQU5 681 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.02□□□□□ -2.09
TRAPPC13-211ENST00000512009 GOLGA6L6A8MZA4 724 aa2.01□□□□□ -2.09
TRAPPC13-211ENST00000512009 TULP1O00294 542 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms