RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SERPINB13Q9UIV8 391 aa16.05■□□□□ 0.16
RNF4-215ENST00000511843 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
RNF4-215ENST00000511843 DOCK3Q8IZD9 2030 aa16.04■□□□□ 0.16
RNF4-215ENST00000511843 GH2P01242 217 aa16.04■□□□□ 0.16
RNF4-215ENST00000511843 ASNSP08243 561 aa16.04■□□□□ 0.16
RNF4-215ENST00000511843 CTGFP29279 349 aa16.04■□□□□ 0.16
RNF4-215ENST00000511843 LACTBP83111 547 aaPredicted RBP16.04■□□□□ 0.16
RNF4-215ENST00000511843 UBE3CQ15386 1083 aa16.04■□□□□ 0.16
RNF4-215ENST00000511843 TTC6Q86TZ1 520 aa16.04■□□□□ 0.16
RNF4-215ENST00000511843 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
RNF4-215ENST00000511843 PARK7Q99497 189 aaKnown RBP16.04■□□□□ 0.16
RNF4-215ENST00000511843 CYP2D7A0A087X1C5 515 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 MX1P20591 662 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 SHMT1P34896 483 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
RNF4-215ENST00000511843 HDAC1Q13547 482 aaPredicted RBP16.03■□□□□ 0.16
RNF4-215ENST00000511843 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 KBTBD3Q8NAB2 608 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 DYNLL2Q96FJ2 89 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 EHD4Q9H223 541 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 AS3MTQ9HBK9 375 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 AGTPBP1Q9UPW5 1226 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 PTPN22Q9Y2R2 807 aa16.03■□□□□ 0.16
RNF4-215ENST00000511843 SALL3Q9BXA9 1300 aa16.02■□□□□ 0.16
RNF4-215ENST00000511843 TNRC18O15417 2968 aaPredicted RBP16.02■□□□□ 0.16
RNF4-215ENST00000511843 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.16
RNF4-215ENST00000511843 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
RNF4-215ENST00000511843 WDR18Q9BV38 432 aa16.02■□□□□ 0.16
RNF4-215ENST00000511843 PTCH2Q9Y6C5 1203 aa16.02■□□□□ 0.16
RNF4-215ENST00000511843 TTC41PQ6P2S7 1318 aa16.01■□□□□ 0.15
RNF4-215ENST00000511843 BCRP11274 1271 aa16.01■□□□□ 0.15
RNF4-215ENST00000511843 PSMC4P43686 418 aa16.01■□□□□ 0.15
RNF4-215ENST00000511843 GABPAQ06546 454 aa16.01■□□□□ 0.15
RNF4-215ENST00000511843 CERKLQ49MI3 558 aaPredicted RBP16.01■□□□□ 0.15
RNF4-215ENST00000511843 PROCA1Q8NCQ7 364 aaPredicted RBP16.01■□□□□ 0.15
RNF4-215ENST00000511843 SMCR8Q8TEV9 937 aaPredicted RBP16.01■□□□□ 0.15
RNF4-215ENST00000511843 OSBP2Q969R2 916 aa16.01■□□□□ 0.15
RNF4-215ENST00000511843 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
RNF4-215ENST00000511843 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
RNF4-215ENST00000511843 RBBP6Q7Z6E9 1792 aaKnown RBP16■□□□□ 0.15
RNF4-215ENST00000511843 M0R2C6 588 aa16■□□□□ 0.15
RNF4-215ENST00000511843 IGHDP01880 384 aa16■□□□□ 0.15
RNF4-215ENST00000511843 BACE1P56817 501 aa16■□□□□ 0.15
RNF4-215ENST00000511843 KIF22Q14807 665 aa16■□□□□ 0.15
RNF4-215ENST00000511843 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
RNF4-215ENST00000511843 ABCB5Q2M3G0 1257 aa16■□□□□ 0.15
RNF4-215ENST00000511843 SH3D19Q5HYK7 790 aa16■□□□□ 0.15
RNF4-215ENST00000511843 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
RNF4-215ENST00000511843 GCC1Q96CN9 775 aa16■□□□□ 0.15
RNF4-215ENST00000511843 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
RNF4-215ENST00000511843 LNPKQ9C0E8 428 aa16■□□□□ 0.15
RNF4-215ENST00000511843 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
RNF4-215ENST00000511843 SLC45A1Q9Y2W3 748 aa16■□□□□ 0.15
RNF4-215ENST00000511843 USP17L10C9JJH3 530 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 USP17L12C9JPN9 530 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 USP17L21D6R901 530 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 MPHOSPH10O00566 681 aaKnown RBP15.99■□□□□ 0.15
RNF4-215ENST00000511843 ERC2O15083 957 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 RNF113AO15541 343 aaKnown RBP15.99■□□□□ 0.15
RNF4-215ENST00000511843 PEX10O60683 326 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 GLRX3O76003 335 aaKnown RBP15.99■□□□□ 0.15
RNF4-215ENST00000511843 GUCY1A2P33402 732 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 SEPT2Q15019 361 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 ANKRD13CQ8N6S4 541 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 ACER1Q8TDN7 264 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 APPBP2Q92624 585 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 STRBPQ96SI9 672 aaKnown RBP15.99■□□□□ 0.15
RNF4-215ENST00000511843 SEC62Q99442 399 aaKnown RBP15.99■□□□□ 0.15
RNF4-215ENST00000511843 ASCC2Q9H1I8 757 aaPredicted RBP15.99■□□□□ 0.15
RNF4-215ENST00000511843 ATP8A2Q9NTI2 1148 aa15.99■□□□□ 0.15
RNF4-215ENST00000511843 FMNL1O95466 1100 aaPredicted RBP15.98■□□□□ 0.15
RNF4-215ENST00000511843 MYCP01106 439 aaPredicted RBP15.98■□□□□ 0.15
RNF4-215ENST00000511843 OSBPP22059 807 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 CLEC10AQ8IUN9 316 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 FEZ1Q99689 392 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 FSD1Q9BTV5 496 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 EMILIN3Q9NT22 766 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 GINM1Q9NU53 330 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 TMOD4Q9NZQ9 345 aa15.98■□□□□ 0.15
RNF4-215ENST00000511843 PLXNB2O15031 1838 aa15.97■□□□□ 0.15
RNF4-215ENST00000511843 ARHGEF6Q15052 776 aa15.97■□□□□ 0.15
RNF4-215ENST00000511843 C12orf60Q5U649 245 aa15.97■□□□□ 0.15
RNF4-215ENST00000511843 CTR9Q6PD62 1173 aa15.97■□□□□ 0.15
RNF4-215ENST00000511843 SH3TC2Q8TF17 1288 aa15.97■□□□□ 0.15
RNF4-215ENST00000511843 RWDD1Q9H446 243 aaPredicted RBP15.97■□□□□ 0.15
RNF4-215ENST00000511843 PNMA3Q9UL41 463 aa15.97■□□□□ 0.15
RNF4-215ENST00000511843 PARP14Q460N5 1801 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 GREB1LQ9C091 1923 aaPredicted RBP15.96■□□□□ 0.15
RNF4-215ENST00000511843 GSG1L2A8MUP6 293 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 C19orf81C9J6K1 198 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 GPAA1O43292 621 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 ZFYP08048 801 aaPredicted RBP15.96■□□□□ 0.15
RNF4-215ENST00000511843 AKR1B1P15121 316 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 RGS19P49795 217 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 PDE1AP54750 535 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 AAMPQ13685 434 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 SLC9C1Q4G0N8 1177 aa15.96■□□□□ 0.15
RNF4-215ENST00000511843 SMC5Q8IY18 1101 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms