RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 WDR18Q9BV38 432 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 PORCNQ9H237 461 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
POLR2J3-216ENST00000511773 POTEB2H3BUK9 544 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 GDF11O95390 407 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 ERVK-24P63145 666 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 JAG1P78504 1218 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 GPR142Q7Z601 462 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 APBA2Q99767 749 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 NDUFB9Q9Y6M9 179 aa16.33■□□□□ 0.2
POLR2J3-216ENST00000511773 SPTBN5Q9NRC6 3674 aaKnown RBP16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 ASNSP08243 561 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 HOXA7P31268 230 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 Q3C1V9 767 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 MORN1Q5T089 497 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 ZNF697Q5TEC3 545 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 USP6NLQ92738 828 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 TRIM34Q9BYJ4 488 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 PI4KBQ9UBF8 816 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 AKAP2Q9Y2D5 859 aa16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-216ENST00000511773 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
POLR2J3-216ENST00000511773 WDR78Q5VTH9 848 aa16.31■□□□□ 0.2
POLR2J3-216ENST00000511773 FAM109BQ6ICB4 259 aaPredicted RBP16.31■□□□□ 0.2
POLR2J3-216ENST00000511773 CRACR2BQ8N4Y2 399 aaPredicted RBP16.31■□□□□ 0.2
POLR2J3-216ENST00000511773 MEIS3Q99687 375 aa16.31■□□□□ 0.2
POLR2J3-216ENST00000511773 LRP2BPQ9P2M1 347 aa16.31■□□□□ 0.2
POLR2J3-216ENST00000511773 C19orf81C9J6K1 198 aa16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 E9PSI1 815 aa16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 DNAJC18Q9H819 358 aa16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 CDK5RAP2Q96SN8 1893 aa16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 LTBP2Q14767 1821 aa16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
POLR2J3-216ENST00000511773 TTC28Q96AY4 2481 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 SRGAP3O43295 1099 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 CNGA1P29973 690 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 ALDH1L2Q3SY69 923 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 POTEEQ6S8J3 1075 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 DHX36Q9H2U1 1008 aaKnown RBP16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 FLRT1Q9NZU1 646 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 PRKAG2Q9UGJ0 569 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 ZBTB21Q9ULJ3 1066 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
POLR2J3-216ENST00000511773 FLT1P17948 1338 aa16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 MCAMP43121 646 aa16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 MFSD14CQ5VZR4 134 aa16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 GTF3C2Q8WUA4 911 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 CDX2Q99626 313 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 EMILIN3Q9NT22 766 aa16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 DDX20Q9UHI6 824 aaKnown RBP16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 SAP30BPQ9UHR5 308 aaKnown RBP16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 FOCADQ5VW36 1801 aa16.28■□□□□ 0.2
POLR2J3-216ENST00000511773 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 RTP1P59025 263 aa16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 USP17L2Q6R6M4 530 aa16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 MAFAQ8NHW3 353 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 EDC3Q96F86 508 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 FEZ1Q99689 392 aa16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 PRDM5Q9NQX1 630 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
POLR2J3-216ENST00000511773 CNMDO75829 334 aa16.26■□□□□ 0.19
POLR2J3-216ENST00000511773 GLRX3O76003 335 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-216ENST00000511773 BAG3O95817 575 aa16.26■□□□□ 0.19
POLR2J3-216ENST00000511773 SNRKQ9NRH2 765 aa16.26■□□□□ 0.19
POLR2J3-216ENST00000511773 CDH23Q9H251 3354 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 DNM1LO00429 736 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 GH2P01242 217 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 PLCG2P16885 1265 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 CYP2C19P33261 490 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 CCNA1P78396 465 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 ATP2B2Q01814 1243 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 SLFN5Q08AF3 891 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 SHHQ15465 462 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 ADGRA1Q86SQ6 560 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 LPAR1Q92633 364 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 RABGAP1Q9Y3P9 1069 aa16.25■□□□□ 0.19
POLR2J3-216ENST00000511773 MSCO60682 206 aa16.24■□□□□ 0.19
POLR2J3-216ENST00000511773 HLA-DOAP06340 250 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms