RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 ASNSP08243 561 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 SHMT1P34896 483 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 SREBF2Q12772 1141 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
COL6A6-203ENST00000511332 MANSC4A6NHS7 340 aaPredicted RBP15.32■□□□□ 0.04
COL6A6-203ENST00000511332 CDC45O75419 566 aa15.32■□□□□ 0.04
COL6A6-203ENST00000511332 PTPRAP18433 802 aa15.32■□□□□ 0.04
COL6A6-203ENST00000511332 PPARAQ07869 468 aa15.32■□□□□ 0.04
COL6A6-203ENST00000511332 CERKLQ49MI3 558 aaPredicted RBP15.32■□□□□ 0.04
COL6A6-203ENST00000511332 DSCC1Q9BVC3 393 aa15.32■□□□□ 0.04
COL6A6-203ENST00000511332 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
COL6A6-203ENST00000511332 SGSM2O43147 1006 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 GDF11O95390 407 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 GJA5P36382 358 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 CDK8P49336 464 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 GTF2A2P52657 109 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 MAP2K1Q02750 393 aaPredicted RBP15.31■□□□□ 0.04
COL6A6-203ENST00000511332 EVX2Q03828 476 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 PDE4BQ07343 736 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 MKRN3Q13064 507 aaKnown RBP15.31■□□□□ 0.04
COL6A6-203ENST00000511332 ABCB5Q2M3G0 1257 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 SLC44A5Q8NCS7 719 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 DYNLL2Q96FJ2 89 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 CCDC17Q96LX7 622 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 CABP5Q9NP86 173 aa15.31■□□□□ 0.04
COL6A6-203ENST00000511332 USP17L5A8MUK1 530 aa15.3■□□□□ 0.04
COL6A6-203ENST00000511332 FGAP02671 866 aa15.3■□□□□ 0.04
COL6A6-203ENST00000511332 KIF23Q02241 960 aaPredicted RBP15.3■□□□□ 0.04
COL6A6-203ENST00000511332 SNAPC2Q13487 334 aa15.3■□□□□ 0.04
COL6A6-203ENST00000511332 RRP1BQ14684 758 aaKnown RBP15.3■□□□□ 0.04
COL6A6-203ENST00000511332 IL25Q9H293 177 aa15.3■□□□□ 0.04
COL6A6-203ENST00000511332 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
COL6A6-203ENST00000511332 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
COL6A6-203ENST00000511332 IRF6O14896 467 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 GH2P01242 217 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 CETPP11597 493 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 INHBEP58166 350 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 ESYT1Q9BSJ8 1104 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 BEGAINQ9BUH8 593 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 MKNK2Q9HBH9 465 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 ANAPC4Q9UJX5 808 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 KCNH4Q9UQ05 1017 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
COL6A6-203ENST00000511332 CXCL11O14625 94 aa15.28■□□□□ 0.04
COL6A6-203ENST00000511332 PCP11498 1178 aaKnown RBP15.28■□□□□ 0.04
COL6A6-203ENST00000511332 KIAA1211Q6ZU35 1233 aa15.28■□□□□ 0.04
COL6A6-203ENST00000511332 ZNF280CQ8ND82 737 aa15.28■□□□□ 0.04
COL6A6-203ENST00000511332 ZIC5Q96T25 663 aa15.28■□□□□ 0.04
COL6A6-203ENST00000511332 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.28■□□□□ 0.04
COL6A6-203ENST00000511332 AFG3L2Q9Y4W6 797 aa15.28■□□□□ 0.04
COL6A6-203ENST00000511332 PLIN4Q96Q06 1357 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 CCL15-CCL14A0A0B4J2E2 113 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 TRIM75PA6NK02 468 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 SMIM22K7EJ46 135 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 CA12O43570 354 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 RASA1P20936 1047 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 TM4SF4P48230 202 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 CCL15Q16663 113 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 IMMTQ16891 758 aaKnown RBP15.27■□□□□ 0.04
COL6A6-203ENST00000511332 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 WDR18Q9BV38 432 aa15.27■□□□□ 0.04
COL6A6-203ENST00000511332 RNF41Q9H4P4 317 aaPredicted RBP15.27■□□□□ 0.04
COL6A6-203ENST00000511332 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
COL6A6-203ENST00000511332 A0A0G2JLL6 359 aaPredicted RBP15.26■□□□□ 0.03
COL6A6-203ENST00000511332 TESPA1A2RU30 521 aaPredicted RBP15.26■□□□□ 0.03
COL6A6-203ENST00000511332 ZNF213O14771 459 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 ALDH1A1P00352 501 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 AKR1B1P15121 316 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 NT5C2P49902 561 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 JAG1P78504 1218 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 CTDSPL2Q05D32 466 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 SHROOM1Q2M3G4 852 aaPredicted RBP15.26■□□□□ 0.03
COL6A6-203ENST00000511332 PRRT2Q7Z6L0 340 aaPredicted RBP15.26■□□□□ 0.03
COL6A6-203ENST00000511332 CCDC84Q86UT8 332 aaPredicted RBP15.26■□□□□ 0.03
COL6A6-203ENST00000511332 ZNF444Q8N0Y2 327 aaPredicted RBP15.26■□□□□ 0.03
COL6A6-203ENST00000511332 STK11IPQ8N1F8 1099 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 SAGE1Q9NXZ1 904 aa15.26■□□□□ 0.03
COL6A6-203ENST00000511332 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL6A6-203ENST00000511332 ORC4O43929 436 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 HAND2P61296 217 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 ICA1Q05084 483 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 SPP2Q13103 211 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 SEPT2Q15019 361 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 FASTKD5Q7L8L6 764 aaKnown RBP15.25■□□□□ 0.03
COL6A6-203ENST00000511332 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 STAG1Q8WVM7 1258 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 BRI3BPQ8WY22 251 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 FEZ1Q99689 392 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 SH2D4AQ9H788 454 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 ARHGEF10LQ9HCE6 1279 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
COL6A6-203ENST00000511332 ANO2Q9NQ90 1003 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 WBP1LQ9NX94 342 aa15.25■□□□□ 0.03
COL6A6-203ENST00000511332 PARP14Q460N5 1801 aa15.24■□□□□ 0.03
COL6A6-203ENST00000511332 C19orf81C9J6K1 198 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms