RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SLC10A6Q3KNW5 377 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 TAF7LQ5H9L4 462 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 TMEM67Q5HYA8 995 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 SLC6A19Q695T7 634 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 FILIP1Q7Z7B0 1213 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 C12orf40Q86WS4 652 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 ZSWIM2Q8NEG5 633 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 SGSM3Q96HU1 749 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 GSX1Q9H4S2 264 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 PCDH12Q9NPG4 1184 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 KCNK4Q9NYG8 393 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 COL4A3BPQ9Y5P4 624 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 PTCH2Q9Y6C5 1203 aa7.82□□□□□ -1.16
HMGB1P47-201ENST00000511281 PRAMEF27A3QJZ7 478 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 CHURC1-FNTBB4DL54 471 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 DLL1O00548 723 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 TERTO14746 1132 aaKnown RBP7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 PPP1R12AO14974 1030 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 DDX3YO15523 660 aaKnown RBP7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 SUSD5O60279 629 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 DGKGP49619 791 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 TCEA2Q15560 299 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 BBS9Q3SYG4 887 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 DMRTC2Q8IXT2 367 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 RNF214Q8ND24 703 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 TMEM87BQ96K49 555 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 TJP2Q9UDY2 1190 aa7.81□□□□□ -1.16
HMGB1P47-201ENST00000511281 CCDC163A0A0D9SF12 145 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 IQCA1LA6NCM1 817 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 RGS13O14921 159 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 ADCY3O60266 1144 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 VIL1P09327 827 aaKnown RBP7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 PMS1P54277 932 aaKnown RBP7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 GYS2P54840 703 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 SLC7A5Q01650 507 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 FBXO11Q86XK2 927 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 HID1Q8IV36 788 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 LRRC47Q8N1G4 583 aaKnown RBP7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 ZNF507Q8TCN5 953 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 SLC16A10Q8TF71 515 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 SLC26A8Q96RN1 970 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 SPATA9Q9BWV2 254 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 PLAAQ9Y263 795 aa7.8□□□□□ -1.16
HMGB1P47-201ENST00000511281 RAG1P15918 1043 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 ETF1P62495 437 aaKnown RBP7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 TKFCQ3LXA3 575 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 PPM1JQ5JR12 505 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 ZBTB38Q8NAP3 1195 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 KCT2Q8NC54 265 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 SMG8Q8ND04 991 aaKnown RBP7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 IRF7Q92985 503 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 DHRS1Q96LJ7 313 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 KLHL3Q9UH77 587 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 PFDN2Q9UHV9 154 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 PPP1R9AQ9ULJ8 1098 aa7.79□□□□□ -1.16
HMGB1P47-201ENST00000511281 KIAA1211LQ6NV74 962 aa7.78□□□□□ -1.16
HMGB1P47-201ENST00000511281 FAM13CQ8NE31 585 aa7.78□□□□□ -1.16
HMGB1P47-201ENST00000511281 SMARCC1Q92922 1105 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P47-201ENST00000511281 FANCD2OSQ96PS1 177 aa7.78□□□□□ -1.16
HMGB1P47-201ENST00000511281 ATXN3LQ9H3M9 355 aa7.78□□□□□ -1.16
HMGB1P47-201ENST00000511281 SUCOQ9UBS9 1254 aaKnown RBP7.78□□□□□ -1.16
HMGB1P47-201ENST00000511281 CSADQ9Y600 493 aa7.78□□□□□ -1.16
HMGB1P47-201ENST00000511281 UBOX5O94941 541 aa7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 NAT2P11245 290 aa7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 MASP1P48740 699 aa7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 ANAPC15P60006 121 aa7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 DALRD3Q5D0E6 543 aaKnown RBP7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 FMR1NBQ8N0W7 255 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 UBASH3BQ8TF42 649 aa7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 RAD18Q9NS91 495 aa7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 PCDHB10Q9UN67 800 aa7.77□□□□□ -1.17
HMGB1P47-201ENST00000511281 RFPL3O75679 317 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 TIAF1O95411 115 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 CELA2BP08218 269 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 FAM153BP0C7A2 387 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 ADH5P11766 374 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 SLBPQ14493 270 aaKnown RBP eCLIP7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 DUOXA2Q1HG44 320 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 KIAA1211Q6ZU35 1233 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 KRT26Q7Z3Y9 468 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 TMEM192Q8IY95 271 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 CCDC74BQ96LY2 380 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 RUSC1Q9BVN2 902 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 RNF208Q9H0X6 261 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 FBRSQ9HAH7 460 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 SUSD2Q9UGT4 822 aa7.76□□□□□ -1.17
HMGB1P47-201ENST00000511281 A0A0A0MRY4 1105 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 RAB11FIP3O75154 756 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 CST3P01034 146 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 CAPNS1P04632 268 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 NEFMP07197 916 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 POLR2BP30876 1174 aaKnown RBP7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 AMPD3Q01432 767 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 GNPTABQ3T906 1256 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 PPFIBP1Q86W92 1011 aa7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 RPUSD2Q8IZ73 545 aaKnown RBP7.75□□□□□ -1.17
HMGB1P47-201ENST00000511281 CYB5D2Q8WUJ1 264 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms