RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CLEC17AQ6ZS10 378 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 OR8K1Q8NGG5 319 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 SKIP12755 728 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 ADALQ6DHV7 355 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 SCOCQ9UIL1 159 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 RBM5P52756 815 aaKnown RBP eCLIP9.27□□□□□ -0.931e-7■■■■■ 26.9
HTT-208ENST00000510626 SFMBT2Q5VUG0 894 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 PPP1R21Q6ZMI0 780 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 ANKLE2Q86XL3 938 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
HTT-208ENST00000510626 KRT71Q3SY84 523 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 ICE2Q659A1 982 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 FGFR1OP2Q9NVK5 253 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 PFDN1O60925 122 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 HSPA6P17066 643 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 CCDC82Q8N4S0 544 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 FAF1Q9UNN5 650 aaPredicted RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 ADGBQ8N7X0 1667 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 SPOPO43791 374 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 GLE1Q53GS7 698 aaKnown RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 ADGRL1O94910 1474 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 SMIM24O75264 130 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 ABCF2Q9UG63 623 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 PRG4Q92954 1404 aaPredicted RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 SART1O43290 800 aaKnown RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 RRS1Q15050 365 aaKnown RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 RNF113AO15541 343 aaKnown RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 EPHB4P54760 987 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 HAUS1Q96CS2 278 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 UHRF1BP1LA0JNW5 1464 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 ZPR1O75312 459 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 TSPY3P0CV98 308 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 TSPY8P0CW00 308 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 LINS1Q8NG48 757 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 ANGEL1Q9UNK9 670 aaKnown RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 H7C1D1 291 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 CRCPO75575 148 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 ARHGAP4P98171 946 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 CUEDC2Q9H467 287 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 FAM96AQ9H5X1 160 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 CTNND2Q9UQB3 1225 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 HYOU1Q9Y4L1 999 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 PRAG1Q86YV5 1406 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 KSR2Q6VAB6 950 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 MAPKBP1O60336 1514 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 PTPDC1A2A3K4 754 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 PRR16Q569H4 304 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 PNMA2Q9UL42 364 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 RRP15Q9Y3B9 282 aaKnown RBP9.26□□□□□ -0.93
HTT-208ENST00000510626 TACC3Q9Y6A5 838 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 OLFM3Q96PB7 478 aa9.26□□□□□ -0.93
HTT-208ENST00000510626 GCC2Q8IWJ2 1684 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 SLC17A8Q8NDX2 589 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
HTT-208ENST00000510626 POTEB3A0JP26 581 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 NR1H3Q13133 447 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 BIRC3Q13489 604 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 ANKRD20A4Q4UJ75 823 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 ANKRD20A8PQ5CZ79 823 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 ANKRD20A2Q5SQ80 823 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 ANKRD20A1Q5TYW2 823 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 POTEBQ6S5H4 581 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 MYD88Q99836 296 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 ANGPTL2Q9UKU9 493 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 IKBKBO14920 756 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 WASLO00401 505 aaPredicted RBP9.25□□□□□ -0.93
HTT-208ENST00000510626 PCP11498 1178 aaKnown RBP9.25□□□□□ -0.93
HTT-208ENST00000510626 NME8Q8N427 588 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 IWS1Q96ST2 819 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 TRIM6Q9C030 488 aaPredicted RBP9.25□□□□□ -0.93
HTT-208ENST00000510626 MCF2L2Q86YR7 1114 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 TEX9Q8N6V9 391 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 CCDC8Q9H0W5 538 aaPredicted RBP9.25□□□□□ -0.93
HTT-208ENST00000510626 THAP12O43422 761 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 STX2P32856 288 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 CUL1Q13616 776 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 CCDC89Q8N998 374 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 GNGT1P63211 74 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 CABP5Q9NP86 173 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 TNFAIP3P21580 790 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 ABCD1P33897 745 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 PEX26Q7Z412 305 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 BAIAP2L1Q9UHR4 511 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 GIPC1O14908 333 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 ZFXP17010 805 aaPredicted RBP9.25□□□□□ -0.93
HTT-208ENST00000510626 NAPAP54920 295 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 SLC8A3P57103 927 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 PLCB4Q15147 1175 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 SND1Q7KZF4 910 aaKnown RBP eCLIP9.25□□□□□ -0.93
HTT-208ENST00000510626 NFE2L3Q9Y4A8 694 aa9.25□□□□□ -0.93
HTT-208ENST00000510626 CTNNA1P35221 906 aaKnown RBP9.24□□□□□ -0.93
HTT-208ENST00000510626 COG7P83436 770 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 LRRC8AQ8IWT6 810 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 CDC23Q9UJX2 597 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 TOPBP1Q92547 1522 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 SPECC1L-ADORA2AF8WAN1 911 aa9.24□□□□□ -0.93
HTT-208ENST00000510626 IL9RQ01113 521 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms