RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
DDX41-211ENST00000510171 SYN1P17600 705 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 Q3C1V9 767 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 GTF3C2Q8WUA4 911 aaPredicted RBP12.77□□□□□ -0.37
DDX41-211ENST00000510171 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
DDX41-211ENST00000510171 GPR108Q9NPR9 543 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 RBPJLQ9UBG7 517 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 PALD1Q9ULE6 856 aa12.77□□□□□ -0.37
DDX41-211ENST00000510171 IGSF3O75054 1194 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 GDF11O95390 407 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
DDX41-211ENST00000510171 HLA-DOAP06340 250 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 TRIM27P14373 513 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 ZKSCAN1P17029 563 aaPredicted RBP12.76□□□□□ -0.37
DDX41-211ENST00000510171 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
DDX41-211ENST00000510171 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 DBNDD2Q9BQY9 259 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 ZBTB21Q9ULJ3 1066 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 FLT1P17948 1338 aa12.76□□□□□ -0.37
DDX41-211ENST00000510171 RGS2P41220 211 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 ERVK-9P63128 1117 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 ERVK-24P63145 666 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
DDX41-211ENST00000510171 OS9Q13438 667 aaPredicted RBP12.75□□□□□ -0.37
DDX41-211ENST00000510171 SHROOM1Q2M3G4 852 aaPredicted RBP12.75□□□□□ -0.37
DDX41-211ENST00000510171 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 TNNI3KQ59H18 835 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 GPR142Q7Z601 462 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 ADGRA1Q86SQ6 560 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 DEFB123Q8N688 67 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 USP6NLQ92738 828 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 CLUAP1Q96AJ1 413 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 PAGR1Q9BTK6 254 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
DDX41-211ENST00000510171 FPGT-TNNI3KV9GXZ4 949 aa12.75□□□□□ -0.37
DDX41-211ENST00000510171 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 DOCK2Q92608 1830 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 BCAR3O75815 825 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 CYP7A1P22680 504 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 ZAP70P43403 619 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 MORN1Q5T089 497 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 LHX8Q68G74 356 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 TDHQ8IZJ6 230 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
DDX41-211ENST00000510171 UBE2OQ9C0C9 1292 aaKnown RBP12.74□□□□□ -0.37
DDX41-211ENST00000510171 PORCNQ9H237 461 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 CWC22Q9HCG8 908 aaKnown RBP12.74□□□□□ -0.37
DDX41-211ENST00000510171 TNNQ9UQP3 1299 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
DDX41-211ENST00000510171 PFASO15067 1338 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
DDX41-211ENST00000510171 GLRX3O76003 335 aaKnown RBP12.73□□□□□ -0.37
DDX41-211ENST00000510171 GH2P01242 217 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 COL6A1P12109 1028 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 CCND3P30281 292 aaPredicted RBP12.73□□□□□ -0.37
DDX41-211ENST00000510171 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
DDX41-211ENST00000510171 CCNA1P78396 465 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 POLA2Q14181 598 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 CCL14Q16627 93 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
DDX41-211ENST00000510171 PIH1D3Q9NQM4 214 aaKnown RBP12.73□□□□□ -0.37
DDX41-211ENST00000510171 RABGAP1Q9Y3P9 1069 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 DOCK1Q14185 1865 aa12.73□□□□□ -0.37
DDX41-211ENST00000510171 USP17L15C9J2P7 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L13C9JLJ4 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L11C9JVI0 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L18D6R9N7 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L22D6RA61 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L17D6RBQ6 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L19D6RCP7 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L20D6RJB6 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP5P45974 858 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 USP17L24Q0WX57 530 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 MFSD14CQ5VZR4 134 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 Q7L0L9 218 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 TMEM57Q8N5G2 664 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 SSH3Q8TE77 659 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 FEZ1Q99689 392 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 APBA2Q99767 749 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 RANBP2P49792 3224 aaKnown RBP12.72□□□□□ -0.37
DDX41-211ENST00000510171 MGAMO43451 1857 aa12.72□□□□□ -0.37
DDX41-211ENST00000510171 IDH1O75874 414 aaKnown RBP12.71□□□□□ -0.37
DDX41-211ENST00000510171 USP14P54578 494 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 RAB3GAP1Q15042 981 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 ZYXQ15942 572 aaKnown RBP12.71□□□□□ -0.37
DDX41-211ENST00000510171 LRRC26Q2I0M4 334 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 TATDN1Q6P1N9 297 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 CATSPERGQ6ZRH7 1159 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 MIGA1Q8NAN2 632 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 C12orf42Q96LP6 360 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms